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SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

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 GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

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 EXCLUDE GROUPS:

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SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE 		MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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+ Genes

Genes:

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 15
Number of Genes: 0

Export to: CSV
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Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View dnn62 snp 1 rs1883768
dbSNP Clinvar 		6165419 180.53 C T PASS 0/1 10 MOTIF[MA0139.1:CTCF] MODIFIER None 0.13838 0.13840 None None None None None None CHD5|0.117473003|47.85%
View dnn62 snp 5 rs4957430
dbSNP Clinvar 		41843797 286.77 C T PASS 0/1 46 MOTIF[MA0139.1:CTCF] MODIFIER None 0.21605 0.21610 None None None None None None OXCT1|0.313202771|26.58%
View dnn62 snp 11 rs575375
dbSNP Clinvar 		64535357 738.77 T C PASS 1/1 28 MOTIF[MA0139.1:CTCF] MODIFIER None 0.96865 0.96870 0.03041 None None None None None None SF1|0.639225523|10.49%
View dnn62 snp 13 rs9535292
dbSNP Clinvar 		50244041 295.77 T C PASS 0/1 46 MOTIF[MA0139.1:CTCF] MODIFIER None 0.61062 0.61060 0.37188 None None None None None None EBPL|0.026484478|71.13%
View dnn62 snp 17 rs2189336
dbSNP Clinvar 		5326162 1049.77 G A PASS 0/1 57 MOTIF[MA0139.1:CTCF] MODIFIER None 0.77875 0.77880 0.39428 None None None None None None RPAIN|0.023237381|72.57%
View dnn62 snp 17 rs820387
dbSNP Clinvar 		73746146 623.77 T C PASS 1/1 22 MOTIF[MA0139.1:CTCF] MODIFIER None 0.74062 0.74060 0.21313 None None None None None None ITGB4|0.346553835|24.38%
View dnn62 snp 19 rs338584
dbSNP Clinvar 		41712113 785.77 C G PASS 1/1 27 MOTIF[MA0139.1:CTCF] MODIFIER None 0.28215 0.28210 None None None None None None CYP2S1|0.00746674|83.09%
View dnn62 snp 20 rs6089695
dbSNP Clinvar 		60808026 157.77 C T PASS 0/1 17 MOTIF[MA0139.1:CTCF] MODIFIER None 0.38538 0.38540 None None None None None None None
View dnn62 snp 8 rs1042701
dbSNP Clinvar 		11422045 553.77 G A PASS 0/1 51 MOTIF[MA0139.1:CTCF] MODIFIER None 0.24002 0.24000 None None None None None None BLK|0.095762795|51.98%
View dnn62 snp 11 rs4078520
dbSNP Clinvar 		723429 1113.77 C T PASS 1/1 39 MOTIF[MA0139.1:CTCF] MODIFIER None 0.34165 0.34170 None None None None None None EPS8L2|0.009899843|80.93%
View dnn62 snp 11 rs12793946
dbSNP Clinvar 		13031846 725.77 G A PASS 0/1 53 MOTIF[MA0139.1:CTCF] MODIFIER None 0.05072 0.05072 0.08486 None None None None None None None
View dnn62 snp 14 rs11847538
dbSNP Clinvar 		106877519 200.77 A G PASS 0/1 22 MOTIF[MA0139.1:CTCF] MODIFIER None 0.27875 0.27880 None None None None None None None
View dnn62 snp 14 rs73367258
dbSNP Clinvar 		106877535 206.77 C G PASS 0/1 19 MOTIF[MA0139.1:CTCF] MODIFIER None 0.05351 0.05351 None None None None None None None
View dnn62 snp 15 rs2253603
dbSNP Clinvar 		40565055 704.77 G A PASS 0/1 64 MOTIF[MA0139.1:CTCF] MODIFIER None 0.45447 0.45450 0.42673 None None None None None None PAK6|0.183662894|38.57%
View dnn62 snp 19 rs2301669
dbSNP Clinvar 		19453560 603.77 C A PASS 1/1 22 MOTIF[MA0139.1:CTCF] MODIFIER None 0.52436 0.52440 0.42822 None None None None None None MAU2|0.230960956|33.29%
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