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EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

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+ Genes 13

+ Genes associated with diseases 7

Genes at Omim

ACTG1, GAA, MYO15A, NF1, PMP22, PRKCA, TEX14,
ACTG1 Baraitser-Winter syndrome 2, 614583 (3)
Deafness, autosomal dominant 20/26, 604717 (3)
GAA Glycogen storage disease II, 232300 (3)
MYO15A Deafness, autosomal recessive 3, 600316 (3)
NF1 Leukemia, juvenile myelomonocytic, 607785 (3)
Neurofibromatosis, familial spinal, 162210 (3)
Neurofibromatosis, type 1, 162200 (3)
Neurofibromatosis-Noonan syndrome, 601321 (3)
Watson syndrome, 193520 (3)
PMP22 Charcot-Marie-Tooth disease, type 1A, 118220 (3)
Charcot-Marie-Tooth disease, type 1E, 118300 (3)
Dejerine-Sottas disease, 145900 (3)
Neuropathy, recurrent, with pressure palsies, 162500 (3)
Roussy-Levy syndrome, 180800 (3)
?Neuropathy, inflammatory demyelinating, 139393 (3)
PRKCA Pituitary tumor, invasive (3)
TEX14 ?Spermatogenic failure 23, 617707 (3)

Genes at Clinical Genomics Database

ACTG1, GAA, MYO15A, NF1, PMP22,
ACTG1 Deafness, autosomal dominant 20
Baraitser-Winter syndrome 2
GAA Glycogen storage disease II
MYO15A Deafness, autosomal recessive 3
NF1 Neurofibromatosis type 1, Neurofibromatosis-Noonan syndrome
Watson syndrome
PMP22 Dejerine-Sottas disease
Roussy-Levy syndrome
Charcot-Marie-Tooth syndrome, type 1A
Charcot-Marie-Tooth syndrome with deafness (type 1E)
Neuropathy, hereditary, with liability to pressurve palsies
Neuropathy, inflammatory demyelinating

Genes at HGMD

Summary

Number of Variants: 687
Number of Genes: 13

Export to: CSV

ACTG1
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs1139405
dbSNP Clinvar 		79478019 2133.77 G A PASS 1/1 0 SYNONYMOUS_CODING LOW None 0.75619 0.75620 0.24543 None None None None None None ACTG1|0.983116739|1.38%

FASN
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs4485435
dbSNP Clinvar 		80045086 816.77 G C PASS 0/1 0 SYNONYMOUS_CODING LOW None 0.22304 0.22300 None None None None None None FASN|0.307148829|27.07%

GAA
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs1800304
dbSNP Clinvar 		78082504 89.03 G A LowCoverage 1/1 0 SYNONYMOUS_CODING LOW None 0.60284 0.60280 0.32923 None None None None None None GAA|0.017886334|75.35%

KCNJ12
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs5021699
dbSNP Clinvar 		21319943 15.88 A G LowQual;VeryLowQual 0/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.03 1.00 None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs76681424
dbSNP Clinvar 		21319728 118.77 T C PASS 0/1 0 SYNONYMOUS_CODING LOW None None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs76267885
dbSNP Clinvar 		21319743 76.77 A G PASS 0/1 0 SYNONYMOUS_CODING LOW None None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs1612176
dbSNP Clinvar 		21319767 85.77 C G PASS 0/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.10 0.42 None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs78547883
dbSNP Clinvar 		21319786 85.77 G A PASS 0/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.02 1.00 None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs76506689
dbSNP Clinvar 		21319955 17.84 G A LowQual;VeryLowQual 0/1 0 SYNONYMOUS_STOP LOW None None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs1657744
dbSNP Clinvar 		21319473 47.77 G A LowQual 0/1 0 SYNONYMOUS_CODING LOW None None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs78113532
dbSNP Clinvar 		21319519 16.86 G C LowQD;LowQual;SnpCluster;VeryLowQual 0/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.39 0.02 None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs77987694
dbSNP Clinvar 		21319523 16.86 C T LowQD;LowQual;SnpCluster;VeryLowQual 0/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.00020 0.00020 0.12 0.02 None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs80022364
dbSNP Clinvar 		21319527 16.86 C T LowQD;LowQual;SnpCluster;VeryLowQual 0/1 0 SYNONYMOUS_CODING LOW None 0.00040 0.00040 None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs80335301
dbSNP Clinvar 		21319543 49.77 G A LowQual 0/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.10 0.17 None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs74801394
dbSNP Clinvar 		21319560 49.77 G T LowQual 0/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.38 0.68 None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs112163749
dbSNP Clinvar 		21319650 148.73 CGAG C PASS 0/1 0 CODON_DELETION MODERATE None None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs80203231
dbSNP Clinvar 		21319682 106.77 C T PASS 0/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.02 0.47 None None None None None None KCNJ12|0.437556296|18.82%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs78135255
dbSNP Clinvar 		21319716 118.77 G A PASS 0/1 0 SYNONYMOUS_CODING LOW None None None None None None None KCNJ12|0.437556296|18.82%

KRT19
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs4601
dbSNP Clinvar 		39681475 324.77 A G PASS 1/1 0 SYNONYMOUS_CODING LOW None 0.73183 0.73180 0.37990 None None None None None None KRT19|0.230673274|33.31%

MYO15A
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2955379
dbSNP Clinvar 		18052867 2326.77 T C PASS 1/1 0 SYNONYMOUS_CODING LOW None 0.98982 0.98980 0.00048 None None None None None None MYO15A|0.178183039|39.27%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs200312324
dbSNP Clinvar 		18058705 1143.77 C T PASS 0/1 0 SYNONYMOUS_CODING LOW None 0.00020 0.00020 None None None None None None MYO15A|0.178183039|39.27%

MYO1C
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs4790518
dbSNP Clinvar 		1384066 2275.77 A G PASS 1/1 0 SYNONYMOUS_CODING LOW None 0.99441 0.99440 0.00008 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs9905106
dbSNP Clinvar 		1373518 831.77 T C PASS 0/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.71166 0.71170 0.20991 0.31 0.00 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs8081370
dbSNP Clinvar 		1373612 524.77 C T PASS 0/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.82089 0.82090 0.06325 1.00 0.00 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2286873
dbSNP Clinvar 		1377943 480.77 A G PASS 0/1 0 SYNONYMOUS_CODING LOW None 0.41753 0.41750 0.45141 None None None None None None MYO1C|0.50378708|15.67%

NDEL1
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs6503120
dbSNP Clinvar 		8383894 185.8 A G PASS 1/1 0 SYNONYMOUS_CODING LOW None 0.94649 0.94650 0.06021 None None None None None None NDEL1|0.613271868|11.34%,MYH10|0.223015976|34.06%

NF1
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 . 29560082 21.77 C T LowCoverage;LowQual;VeryLowQual 1/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.00 0.99 None None None None None None NF1|0.993936903|0.88%

PER1
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2253820
dbSNP Clinvar 		8048169 699.77 T C PASS 0/1 0 SYNONYMOUS_CODING LOW None 0.57029 0.57030 0.25957 None None None None None None PER1|0.435705544|18.91%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2735611
dbSNP Clinvar 		8048283 769.77 G A PASS 0/1 0 SYNONYMOUS_CODING LOW None 0.57049 0.57050 0.25774 None None None None None None PER1|0.435705544|18.91%

PMP22
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs13422
dbSNP Clinvar 		15134175 1469.77 T G PASS 0/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.59545 0.59540 0.00 None None None None None None PMP22|0.168834335|40.48%

PRKCA
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs6504459
dbSNP Clinvar 		64783081 1548.77 G A PASS 1/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.99201 0.99200 0.01984 1.00 0.00 None None None None None None PRKCA|0.893842252|3.58%

TEX14
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs7225128
dbSNP Clinvar 		56636854 21.77 T C LowCoverage;LowQual;VeryLowQual 1/1 0 SYNONYMOUS_CODING LOW None 0.89697 0.89700 0.17577 None None None None None None TEX14|0.033776533|67.85%
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs138333670
dbSNP Clinvar 		22255317 196.9 G T PASS 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs75191976
dbSNP Clinvar 		22255378 196.9 C T PASS 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs144265268
dbSNP Clinvar 		22255393 196.9 A G PASS 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs7216495
dbSNP Clinvar 		22255402 152.03 C T LowCoverage 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs78796271
dbSNP Clinvar 		22255410 152.03 T A LowCoverage 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2364056
dbSNP Clinvar 		21549934 175.77 A G PASS 0/1 0 None None None 0.00319 0.00320 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2364057
dbSNP Clinvar 		21549946 130.77 A C PASS 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2364058
dbSNP Clinvar 		21549989 295.77 A G SnpCluster 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs80220586
dbSNP Clinvar 		21549997 73.77 A G SnpCluster 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2364059
dbSNP Clinvar 		21549999 298.77 A G SnpCluster 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs145467120
dbSNP Clinvar 		21550005 73.77 A C SnpCluster 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs797018989
dbSNP Clinvar 		21550013 73.77 T A PASS 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs9747553
dbSNP Clinvar 		21550794 44.74 T G LowCoverage;LowQual 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs375519101
dbSNP Clinvar 		21669177 21.77 G T LowCoverage;LowQual;VeryLowQual 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs368900719
dbSNP Clinvar 		21669199 62.74 G A LowCoverage 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs372648910
dbSNP Clinvar 		21669207 62.74 A G LowCoverage 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs374518180
dbSNP Clinvar 		21669869 62.74 C T LowCoverage 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs9630747
dbSNP Clinvar 		22251759 21.77 T G LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.53355 0.53350 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs4305055
dbSNP Clinvar 		22251865 31.74 A T LowCoverage;LowQual 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs75533545
dbSNP Clinvar 		22253069 43.98 G A LowCoverage;LowQual 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs76548547
dbSNP Clinvar 		22253099 136.77 G C PASS 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs74610948
dbSNP Clinvar 		22253112 136.77 C T SnpCluster 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs74758461
dbSNP Clinvar 		22253118 136.77 G A SnpCluster 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs201591298
dbSNP Clinvar 		22253121 136.77 C G SnpCluster 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs4608369
dbSNP Clinvar 		22253128 136.77 C T SnpCluster 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs375048301
dbSNP Clinvar 		22253453 18.59 T C LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.04333 0.04333 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs6565433
dbSNP Clinvar 		22253455 18.59 A G LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.70847 0.70850 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs4095386
dbSNP Clinvar 		22254675 331.78 T A SnpCluster 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs9747431
dbSNP Clinvar 		22254760 225.84 A C PASS 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs76303625
dbSNP Clinvar 		22254772 196.9 G A PASS 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs79994959
dbSNP Clinvar 		22254788 196.9 C T SnpCluster 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs78738235
dbSNP Clinvar 		22254791 196.9 A T SnpCluster 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs78718388
dbSNP Clinvar 		22254793 196.9 G C SnpCluster 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs80177154
dbSNP Clinvar 		22254794 196.9 A T SnpCluster 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs77045832
dbSNP Clinvar 		22254813 196.9 G T PASS 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs201874314
dbSNP Clinvar 		22254818 47.77 G A LowQual 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs79622515
dbSNP Clinvar 		22254836 196.9 A C PASS 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs6565436
dbSNP Clinvar 		22254838 196.9 A C PASS 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs4107681
dbSNP Clinvar 		22254868 94.77 C G LowCoverage 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs4493091
dbSNP Clinvar 		22254874 136.77 G A PASS 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs199681152
dbSNP Clinvar 		22254883 94.77 A G LowCoverage 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 . 8017164 62.74 A G LowCoverage 1/1 0 None None None None None None None None None ALOXE3|0.073088496|56.77%
View de2670_08232016_bwamem filtered haplotype snpindel 17 . 8017165 62.74 A T LowCoverage 1/1 0 None None None None None None None None None ALOXE3|0.073088496|56.77%
View de2670_08232016_bwamem filtered haplotype snpindel 17 . 8017313 21.77 A C LowCoverage;LowQual;VeryLowQual 1/1 0 None None None None None None None None None ALOXE3|0.073088496|56.77%
View de2670_08232016_bwamem filtered haplotype snpindel 17 . 11776194 62.74 A G LowCoverage;SnpCluster 1/1 0 None None None None None None None None None DNAH9|0.176098085|39.51%
View de2670_08232016_bwamem filtered haplotype snpindel 17 . 11776198 62.74 C T LowCoverage;SnpCluster 1/1 0 None None None None None None None None None DNAH9|0.176098085|39.51%
View de2670_08232016_bwamem filtered haplotype snpindel 17 . 1367104 316.77 G C PASS 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs6416877
dbSNP Clinvar 		1367122 1019.77 T G PASS 1/1 0 None None None 0.73842 0.73840 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs4456534
dbSNP Clinvar 		22254907 94.77 G C LowCoverage 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs7501661
dbSNP Clinvar 		1367296 1443.77 A G PASS 1/1 0 None None None 0.34705 0.34700 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs8066044
dbSNP Clinvar 		1367352 1628.77 A G PASS 1/1 0 None None None 0.73502 0.73500 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs557106289
dbSNP Clinvar 		1368109 157.73 C CTT PASS 0/1 0 None None None 0.58886 0.58890 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs11538162
dbSNP Clinvar 		1368823 819.77 G A PASS 0/1 0 None None None 0.04892 0.04892 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs9910133
dbSNP Clinvar 		1370095 209.77 G A PASS 0/1 0 None None None 0.73183 0.73180 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs62054783
dbSNP Clinvar 		20780325 21.77 G C LowCoverage;LowQual;VeryLowQual 1/1 0 None None None None None None None None None CCDC144NL|0.000779475|96.79%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2302459
dbSNP Clinvar 		1370459 1388.77 T C PASS 1/1 0 None None None 0.73662 0.73660 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2302457
dbSNP Clinvar 		1370720 352.77 C T PASS 0/1 0 None None None 0.32867 0.32870 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs8069059
dbSNP Clinvar 		1371088 280.8 T C PASS 1/1 0 None None None 0.73662 0.73660 0.21442 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs8072859
dbSNP Clinvar 		1371123 611.77 T C PASS 1/1 0 None None None 0.73682 0.73680 0.21522 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs8079811
dbSNP Clinvar 		1371473 1521.77 C G PASS 1/1 0 None None None 0.63419 0.63420 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs8080389
dbSNP Clinvar 		1371818 1410.77 C T PASS 1/1 0 None None None 1.00000 1.00000 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2286870
dbSNP Clinvar 		1371996 410.77 G A PASS 0/1 0 None None None 0.64317 0.64320 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs8069552
dbSNP Clinvar 		1372008 1152.77 A G PASS 1/1 0 None None None 1.00000 1.00000 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs9303175
dbSNP Clinvar 		1372987 1861.77 T G PASS 1/1 0 None None None 0.57468 0.57470 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2286871
dbSNP Clinvar 		1377878 965.77 T C PASS 1/1 0 None None None 0.81190 0.81190 0.08827 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2286875
dbSNP Clinvar 		1380955 748.77 G T PASS 0/1 0 None None None 0.13419 0.13420 None None None None None None MYO1C|0.50378708|15.67%
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs188515828
dbSNP Clinvar 		47535211 19.79 G C LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.00020 0.00020 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 17 rs2072445
dbSNP Clinvar 		47587712 17.84 G T LowQual;VeryLowQual 0/1 0 None None None 0.08806 0.08806 None None None None None None NGFR|0.932846981|2.71%