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SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
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SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

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EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

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CADD

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EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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+ Genes 6

+ Genes associated with diseases 3

Genes at Omim

MYO1E, SEMA7A, STRC,
MYO1E Glomerulosclerosis, focal segmental, 6, 614131 (3)
SEMA7A [Blood group, John-Milton-Hagen system], 614745 (3)
STRC Deafness, autosomal recessive 16, 603720 (3)

Genes at Clinical Genomics Database

MYO1E, SEMA7A, STRC,
MYO1E Focal segmental glomerulosclerosis 6
SEMA7A Blood group, John Milton Hagen
STRC Deafness, autosomal recessive 16

Genes at HGMD

Summary

Number of Variants: 466
Number of Genes: 6

Export to: CSV

CATSPER2
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs8042868
dbSNP Clinvar 		43939642 3745.77 C T PASS 1/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.20347 0.20350 0.14326 0.03 0.00 None None None None None None STRC|0.165616336|40.85%,CATSPER2|0.020822409|73.76%

KIAA1199
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs1553647
dbSNP Clinvar 		81212608 2379.77 G A PASS 1/1 0 SYNONYMOUS_CODING LOW None 0.98842 0.98840 0.01161 None None None None None None CEMIP|0.062592295|59.18%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2271160
dbSNP Clinvar 		81212521 1174.77 T C PASS 0/1 0 SYNONYMOUS_CODING LOW None 0.17672 0.17670 0.13771 None None None None None None CEMIP|0.062592295|59.18%

LDHAL6B
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs3825937
dbSNP Clinvar 		59500116 73.28 T C LowCoverage 1/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.39896 0.39900 0.27234 0.06 0.55 None None None None None None MYO1E|0.320334371|26.13%,LDHAL6B|0.001955723|91.11%

MYO1E
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2230155
dbSNP Clinvar 		59510189 1593.77 G A PASS 0/1 0 SYNONYMOUS_CODING LOW None 0.50719 0.50720 0.33928 None None None None None None MYO1E|0.320334371|26.13%

SEMA7A
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs741761
dbSNP Clinvar 		74703929 233.77 T C PASS 0/1 0 SYNONYMOUS_CODING LOW None 0.00120 0.00120 0.39250 None None None None None None SEMA7A|0.073945607|56.52%

STRC
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2920780
dbSNP Clinvar 		43897499 2124.77 T C PASS 1/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.29094 0.29090 0.21773 0.60 0.00 None None None None None None STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs12438025
dbSNP Clinvar 		43892847 2582.77 G C PASS 1/1 0 SYNONYMOUS_CODING LOW None 0.29453 0.29450 0.22218 None None None None None None CKMT1B|0.173345194|39.89%,STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs3097773
dbSNP Clinvar 		43893072 2115.77 G A PASS 1/1 0 SPLICE_SITE_REGION+SYNONYMOUS_CODING LOW None 0.39577 0.39580 0.29298 None None None None None None CKMT1B|0.173345194|39.89%,STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2729509
dbSNP Clinvar 		43910440 1892.77 A G PASS 1/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.43610 0.43610 1.00 0.00 None None None None None None STRC|0.165616336|40.85%
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs299672
dbSNP Clinvar 		20489987 62.74 A G LowCoverage 1/1 0 None None None 0.91633 0.91630 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs774557619
dbSNP Clinvar 		21037923 138.73 T C PASS 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs760863816
dbSNP Clinvar 		21038125 130.73 ATAC A PASS 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs746070306
dbSNP Clinvar 		21038267 89.77 T A PASS 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs867951936
dbSNP Clinvar 		21038660 40.74 T G LowCoverage;LowQual 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs61998326
dbSNP Clinvar 		21145489 55.78 A C LowCoverage 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2605992
dbSNP Clinvar 		21145503 55.78 G T LowCoverage 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs7181958
dbSNP Clinvar 		21145789 124.77 C T PASS 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs12909031
dbSNP Clinvar 		23061487 21.77 G C LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.83367 0.83370 None None None None None None NIPA1|0.380603066|22%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs72705561
dbSNP Clinvar 		24602017 21.77 G A LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.21745 0.21750 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs12904131
dbSNP Clinvar 		24787433 21.77 T G LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.40415 0.40420 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs8024076
dbSNP Clinvar 		26094342 38.74 T C LowCoverage;LowQual 1/1 0 None None None 0.97784 0.97780 None None None None None None ATP10A|0.032097365|68.57%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2114486
dbSNP Clinvar 		26802083 21.77 T A LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.97824 0.97820 None None None None None None GABRB3|0.70386762|8.38%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs5811517,rs398026676
dbSNP Clinvar 		28084832 37.7 GA G LowCoverage;LowQual 1/1 0 None None None 1.00000 1.00000 None None None None None None OCA2|0.051084129|62.33%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs138088246
dbSNP Clinvar 		28803398 13.71 A G LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.46026 0.46030 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs1679648
dbSNP Clinvar 		29972947 62.74 A T LowCoverage 1/1 0 None None None 0.98522 0.98520 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs1679649
dbSNP Clinvar 		29972948 62.74 T C LowCoverage 1/1 0 None None None 0.98502 0.98500 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2955781
dbSNP Clinvar 		31256475 21.77 C T LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.83866 0.83870 None None None None None None MTMR10|0.112999471|48.66%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2959048
dbSNP Clinvar 		31256611 21.77 G A LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.99361 0.99360 None None None None None None MTMR10|0.112999471|48.66%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs3784596
dbSNP Clinvar 		31356831 471.77 C A PASS 1/1 0 None None None 0.43730 0.43730 None None None None None None TRPM1|0.068591647|57.82%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs3784598
dbSNP Clinvar 		31356947 662.77 T C PASS 1/1 0 None None None 0.42312 0.42310 None None None None None None TRPM1|0.068591647|57.82%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs919001
dbSNP Clinvar 		31357138 1045.77 A G PASS 1/1 0 None None None 0.57828 0.57830 None None None None None None TRPM1|0.068591647|57.82%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs3825950
dbSNP Clinvar 		31357591 355.77 G A PASS 1/1 0 None None None 0.64796 0.64800 None None None None None None TRPM1|0.068591647|57.82%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs66464120
dbSNP Clinvar 		32156666 53.28 C T LowCoverage 1/1 0 None None None 0.16953 0.16950 None None None None None None OTUD7A|0.076054445|56.07%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs1588778
dbSNP Clinvar 		32239665 21.77 C A LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.98702 0.98700 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs4780170
dbSNP Clinvar 		34026502 21.77 C T LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.29473 0.29470 None None None None None None RYR3|0.50685085|15.52%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs62012650
dbSNP Clinvar 		34063197 62.74 A G LowCoverage 1/1 0 None None None 0.16574 0.16570 None None None None None None RYR3|0.50685085|15.52%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs4620925
dbSNP Clinvar 		34063200 62.74 C G LowCoverage 1/1 0 None None None 0.38638 0.38640 None None None None None None RYR3|0.50685085|15.52%
View de2670_08232016_bwamem filtered haplotype snpindel 15 . 34248712 21.77 G A LowCoverage;LowQual;VeryLowQual 1/1 0 None None None None None None None None None AVEN|0.037575836|66.59%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs141143365,rs59308953
dbSNP Clinvar 		34268671 53.7 T TAACA LowCoverage 1/1 0 None None None 0.80711 0.80710 None None None None None None AVEN|0.037575836|66.59%,CHRM5|0.182360534|38.74%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs347894
dbSNP Clinvar 		34664964 16.83 T C LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.63279 0.63280 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs347895
dbSNP Clinvar 		34666127 347.77 T G PASS 1/1 0 None None None 0.88419 0.88420 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs8042393
dbSNP Clinvar 		34812387 21.77 A G LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.01078 0.01078 None None None None None None GOLGA8A|0.001476109|92.88%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs3729755
dbSNP Clinvar 		35084215 95.82 C G PASS 0/1 0 None None None 0.27716 0.27720 None None None None None None ACTC1|0.66284814|9.59%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2070664
dbSNP Clinvar 		35085201 36.74 C T LowCoverage;LowQual 1/1 0 None None None 0.64058 0.64060 None None None None None None ACTC1|0.66284814|9.59%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs7165896
dbSNP Clinvar 		35850839 21.77 T C LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.94209 0.94210 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs5811877
dbSNP Clinvar 		36218920 1035.73 AT A SnpCluster 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs6495804
dbSNP Clinvar 		36218922 1314.77 T A SnpCluster 0/1 0 None None None 0.71865 0.71870 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs770312353
dbSNP Clinvar 		36218923 1036.73 AATT A SnpCluster 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs62005169
dbSNP Clinvar 		36218926 1314.77 T A SnpCluster 0/1 0 None None None 0.91653 0.91650 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs1532477
dbSNP Clinvar 		36218930 2955.77 T A SnpCluster 1/1 0 None None None 0.86841 0.86840 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs1532476
dbSNP Clinvar 		36218934 2885.77 T A SnpCluster 1/1 0 None None None 0.65695 0.65690 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs5811879,rs559594573,rs751835857
dbSNP Clinvar 		36219168 189.73 CA C PASS 0/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs12440649
dbSNP Clinvar 		37966084 21.77 C T LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.55871 0.55870 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs145934061,rs56160726
dbSNP Clinvar 		36219181 106.73 AAAG A PASS 0/1 0 None None None 0.47444 0.47440 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs12708544
dbSNP Clinvar 		36877353 62.74 G A LowCoverage 1/1 0 None None None 0.36182 0.36180 None None None None None None C15orf41|0.924370547|2.88%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs13329362
dbSNP Clinvar 		36877356 62.74 T C LowCoverage 1/1 0 None None None 0.36122 0.36120 None None None None None None C15orf41|0.924370547|2.88%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs117147420
dbSNP Clinvar 		37264712 290.77 C T PASS 0/1 0 None None None 0.13478 0.13480 None None None None None None MEIS2|0.996841535|0.69%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs1194768
dbSNP Clinvar 		37264900 1208.77 A T PASS 1/1 0 None None None 0.92812 0.92810 None None None None None None MEIS2|0.996841535|0.69%
View de2670_08232016_bwamem filtered haplotype snpindel 15 . 37569377 21.77 A G LowCoverage;LowQual;VeryLowQual 1/1 0 None None None None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs8036371
dbSNP Clinvar 		38617282 21.77 A G LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.79633 0.79630 None None None None None None SPRED1|0.566720681|13.12%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs11855778
dbSNP Clinvar 		38738917 21.77 G T LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.68311 0.68310 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs58185015
dbSNP Clinvar 		39269390 44.74 T A LowCoverage;LowQual 1/1 0 None None None 0.37720 0.37720 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs8043207
dbSNP Clinvar 		39687127 21.77 G A LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.53455 0.53450 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs8026797
dbSNP Clinvar 		40426913 85.03 C A LowCoverage 1/1 0 None None None 0.42352 0.42350 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs4924419
dbSNP Clinvar 		40430212 55.28 A G LowCoverage 1/1 0 None None None 0.44109 0.44110 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2289331
dbSNP Clinvar 		40699940 72.28 T C LowCoverage 1/1 0 None None None 0.64796 0.64800 0.40443 None None None None None None IVD|0.143382438|43.94%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs3214685,rs386382797
dbSNP Clinvar 		40700006 90.25 G GTT LowCoverage 1/1 0 None None None 0.64677 0.64680 None None None None None None IVD|0.143382438|43.94%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs10518693
dbSNP Clinvar 		40700022 42.74 C T LowCoverage;LowQual 1/1 0 None None None 0.47284 0.47280 None None None None None None IVD|0.143382438|43.94%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs11790
dbSNP Clinvar 		40712737 71.28 T C LowCoverage 1/1 0 None None None 0.61122 0.61120 None None None None None None IVD|0.143382438|43.94%
View de2670_08232016_bwamem filtered haplotype snpindel 15 . 42694156 21.77 C A LowCoverage;LowQual;VeryLowQual 1/1 0 None None None None None None None None None CAPN3|0.385639795|21.69%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs6493071
dbSNP Clinvar 		43208806 21.77 C G LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.82847 0.82850 None None None None None None TTBK2|0.577208423|12.7%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs142915502
dbSNP Clinvar 		43400576 21.77 A C LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.06250 0.06250 None None None None None None EPB42|0.035961479|67.14%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs143442482
dbSNP Clinvar 		43515927 21.77 C A LowCoverage;LowQual;VeryLowQual 1/1 0 None None None 0.04253 0.04253 None None None None None None None
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs56397895
dbSNP Clinvar 		43891235 329.77 G C PASS 1/1 0 None None None 0.39637 0.39640 None None None None None None CKMT1B|0.173345194|39.89%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2439
dbSNP Clinvar 		43891512 1561.77 C T PASS 1/1 0 None None None 0.29273 0.29270 0.22180 None None None None None None CKMT1B|0.173345194|39.89%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs12437957
dbSNP Clinvar 		43892893 2335.77 A G PASS 1/1 0 None None None 0.29413 0.29410 0.21271 None None None None None None CKMT1B|0.173345194|39.89%,STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2447196
dbSNP Clinvar 		43893818 1517.77 G A PASS 1/1 0 None None None 0.29193 0.29190 None None None None None None CKMT1B|0.173345194|39.89%,STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2447197
dbSNP Clinvar 		43894976 209.8 G A PASS 1/1 0 None None None 0.28834 0.28830 None None None None None None CKMT1B|0.173345194|39.89%,STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2447198
dbSNP Clinvar 		43895118 628.77 T C PASS 1/1 0 None None None 0.32248 0.32250 None None None None None None CKMT1B|0.173345194|39.89%,STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs28495368
dbSNP Clinvar 		43895642 4418.77 G A PASS 1/1 0 None None None 0.28754 0.28750 0.18139 None None None None None None CKMT1B|0.173345194|39.89%,STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2260160
dbSNP Clinvar 		43895643 4418.77 C T PASS 1/1 0 None None None 0.34345 0.34350 0.23126 None None None None None None CKMT1B|0.173345194|39.89%,STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs369601009
dbSNP Clinvar 		43903224 1547.73 G GT... PASS 1/2 0 None None None 0.00080 None None None None None None STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2614819
dbSNP Clinvar 		43896446 2412.77 C A PASS 1/1 0 None None None 0.29233 0.29230 None None None None None None CKMT1B|0.173345194|39.89%,STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 . 43896488 920.77 C T PASS 0/1 0 None None None None None None None None None CKMT1B|0.173345194|39.89%,STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2614822
dbSNP Clinvar 		43896798 3043.77 G C PASS 1/1 0 None None None 0.29113 0.29110 0.21031 None None None None None None CKMT1B|0.173345194|39.89%,STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2467434
dbSNP Clinvar 		43897125 1103.77 A G PASS 0/1 0 None None None 0.01178 0.01178 None None None None None None STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs200280488,rs59946403
dbSNP Clinvar 		43897809 454.74 TA T PASS 1/1 0 None None None 0.33107 0.33110 None None None None None None STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2614801
dbSNP Clinvar 		43902109 1269.77 C T PASS 1/1 0 None None None 0.32867 0.32870 None None None None None None STRC|0.165616336|40.85%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2927072
dbSNP Clinvar 		43922398 579.77 T C PASS 1/1 0 None None None 0.28974 0.28970 None None None None None None STRC|0.165616336|40.85%,CATSPER2|0.020822409|73.76%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2915776
dbSNP Clinvar 		43922586 1509.77 T C PASS 1/1 0 None None None 0.28734 0.28730 None None None None None None STRC|0.165616336|40.85%,CATSPER2|0.020822409|73.76%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs3099045
dbSNP Clinvar 		43923955 704.77 A C PASS 1/1 0 None None None 0.40715 0.40710 None None None None None None STRC|0.165616336|40.85%,CATSPER2|0.020822409|73.76%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs28366727
dbSNP Clinvar 		43924174 1952.77 C G PASS 1/1 0 None None None 0.00379 0.42770 None None None None None None STRC|0.165616336|40.85%,CATSPER2|0.020822409|73.76%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs2920781
dbSNP Clinvar 		43924682 3565.77 G A PASS 1/1 0 None None None 0.28854 0.28850 None None None None None None STRC|0.165616336|40.85%,CATSPER2|0.020822409|73.76%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs7169097
dbSNP Clinvar 		43925134 4696.77 T A SnpCluster 1/1 0 None None None 0.45188 0.45190 None None None None None None STRC|0.165616336|40.85%,CATSPER2|0.020822409|73.76%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs199882327
dbSNP Clinvar 		43925135 4696.77 T G SnpCluster 1/1 0 None None None 0.45188 0.45190 None None None None None None STRC|0.165616336|40.85%,CATSPER2|0.020822409|73.76%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs7167634
dbSNP Clinvar 		43925140 4651.77 A G SnpCluster 1/1 0 None None None 0.45188 0.45190 None None None None None None STRC|0.165616336|40.85%,CATSPER2|0.020822409|73.76%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs7169112
dbSNP Clinvar 		43925147 4550.77 T G PASS 1/1 0 None None None 0.45188 0.45190 None None None None None None STRC|0.165616336|40.85%,CATSPER2|0.020822409|73.76%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs59098109,rs397955507
dbSNP Clinvar 		43925307 2478.73 T TTA PASS 1/1 0 None None None 0.28914 0.28910 None None None None None None STRC|0.165616336|40.85%,CATSPER2|0.020822409|73.76%
View de2670_08232016_bwamem filtered haplotype snpindel 15 rs375933133
dbSNP Clinvar 		43927623 114.73 CA C PASS 0/1 0 None None None None None None None None None STRC|0.165616336|40.85%,CATSPER2|0.020822409|73.76%