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EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

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VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 60
Number of Genes: 7

Export to: CSV
  • Page 1 of 1

C1orf222

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 20166-01-01_s20-kopie 1 rs2803336
dbSNP Clinvar
1875858 7106.11 C G PASS 0/1 858 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.38498 0.38500 0.04 0.99 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs2803295
dbSNP Clinvar
1861582 13531.89 C T PASS 0/1 1193 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.35583 0.35580 0.00 0.99 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs2803326
dbSNP Clinvar
1873514 8236.14 A G PASS 0/1 900 SYNONYMOUS_CODING LOW SILENT 0.59245 0.59250 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs16824585
dbSNP Clinvar
1896440 11643.52 G A PASS 0/1 916 None None None 0.21665 0.21670 0.24062 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs2803327
dbSNP Clinvar
1873525 8460.67 T C PASS 0/1 902 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.59245 0.59250 0.49 0.00 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs2748972
dbSNP Clinvar
1891477 9207.03 A G PASS 0/1 759 None None None 0.13219 0.13220 0.16057 0.00 0.00 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs3820011
dbSNP Clinvar
1888193 5853.61 C A PASS 0/1 681 None None None 0.18690 0.18690 0.21876 0.00 1.00 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs28575980
dbSNP Clinvar
1887245 9931.49 G A PASS 0/1 875 None None None 0.18131 0.18130 0.20683 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs2803337
dbSNP Clinvar
1875859 7097.33 A G PASS 0/1 860 SYNONYMOUS_CODING LOW SILENT 0.39776 0.39780 None None None None None None CFAP74|0.001720148|91.8%

CCDC19

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 20166-01-01_s20-kopie 1 rs7550537
dbSNP Clinvar
159850401 5765.28 C G PASS 0/1 491 SYNONYMOUS_CODING LOW SILENT 0.12300 0.12300 0.11395 None None None None None None CFAP45|0.081179858|54.94%

DNALI1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 20166-01-01_s20-kopie 1 rs140783025
dbSNP Clinvar
38022581 11216.98 A G PASS 0/1 893 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00015 0.06 0.00 None None None None None None DNALI1|0.256307067|31.03%
View 20166-01-01_s20-kopie 1 rs11749
dbSNP Clinvar
38023316 4375.13 C T PASS 0/1 475 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.20427 0.20430 0.20283 0.05 0.01 None None None None None None DNALI1|0.256307067|31.03%

EFCAB2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 20166-01-01_s20-kopie 1 rs10927387
dbSNP Clinvar
245245402 2831.54 C T PASS 0/1 320 SYNONYMOUS_CODING LOW SILENT 0.28934 0.28930 0.34638 None None None None None None EFCAB2|0.09874582|51.4%

IQGAP3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 20166-01-01_s20-kopie 1 rs1171566
dbSNP Clinvar
156499969 28303.76 T C PASS 1/1 1079 SYNONYMOUS_CODING LOW SILENT 0.60563 0.60560 0.46294 None None None None None None IQGAP3|0.099380714|51.29%
View 20166-01-01_s20-kopie 1 rs2066377
dbSNP Clinvar
156536221 13560.99 G C PASS 1/1 502 SYNONYMOUS_CODING LOW SILENT 0.95986 0.95990 0.04252 None None None None None None IQGAP3|0.099380714|51.29%
View 20166-01-01_s20-kopie 1 rs947662
dbSNP Clinvar
156536251 17415.82 T C PASS 1/1 669 SYNONYMOUS_CODING LOW SILENT 0.95986 0.95990 0.04252 None None None None None None IQGAP3|0.099380714|51.29%
View 20166-01-01_s20-kopie 1 rs1171547
dbSNP Clinvar
156532977 22048.32 T C PASS 1/1 855 SYNONYMOUS_CODING LOW SILENT 0.95986 0.95990 0.04252 None None None None None None IQGAP3|0.099380714|51.29%
View 20166-01-01_s20-kopie 1 rs2488269
dbSNP Clinvar
156526444 22724.49 T C PASS 1/1 853 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.96006 0.96010 0.04244 1.00 0.00 None None None None None None IQGAP3|0.099380714|51.29%
View 20166-01-01_s20-kopie 1 rs744224
dbSNP Clinvar
156518379 18903.49 G A PASS 1/1 668 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.40715 0.40710 0.28341 0.13 0.00 None None None None None None IQGAP3|0.099380714|51.29%

RP11-156E8.1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 20166-01-01_s20-kopie 1 rs7545078
dbSNP Clinvar
245133489 4654.73 T G PASS 0/1 361 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.48762 0.48760 None None None None None None EFCAB2|0.09874582|51.4%
View 20166-01-01_s20-kopie 1 rs10536649
dbSNP Clinvar
245133549 4059.75 GGC G PASS 0/1 227 FRAME_SHIFT HIGH 0.48203 0.48200 None None None None None None EFCAB2|0.09874582|51.4%
View 20166-01-01_s20-kopie 1 rs145835471,rs78699431
dbSNP Clinvar
245133623 11072.02 T TC... PASS 0/1 362 FRAME_SHIFT HIGH 0.49720 0.49720 None None None None None None EFCAB2|0.09874582|51.4%
View 20166-01-01_s20-kopie 1 rs61844237
dbSNP Clinvar
245133662 5989.21 G C PASS 0/1 558 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.37121 0.37120 0.30 None None None None None None EFCAB2|0.09874582|51.4%
View 20166-01-01_s20-kopie 1 rs7542813
dbSNP Clinvar
245133539 6669.21 A G PASS 1/1 253 NON_SYNONYMOUS_CODING MODERATE MISSENSE 1.00000 1.00000 0.00 None None None None None None EFCAB2|0.09874582|51.4%

SPAG17

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 20166-01-01_s20-kopie 1 rs1935992
dbSNP Clinvar
118693217 1228.54 T C PASS 0/1 177 SYNONYMOUS_CODING LOW SILENT 0.22704 0.22700 0.16050 None None None None None None SPAG17|0.037205443|66.71%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 20166-01-01_s20-kopie 1 rs6619
dbSNP Clinvar
38030696 5711.78 T C PASS 0/1 579 None None None 0.41094 0.41090 0.37552 None None None None None None DNALI1|0.256307067|31.03%
View 20166-01-01_s20-kopie 1 rs41267325
dbSNP Clinvar
38032294 3804.28 C T PASS 0/1 386 None None None 0.02137 0.02137 None None None None None None DNALI1|0.256307067|31.03%
View 20166-01-01_s20-kopie 1 rs4658701
dbSNP Clinvar
245286313 6954.08 G A PASS 0/1 515 None None None 0.09924 0.09924 None None None None None None EFCAB2|0.09874582|51.4%
View 20166-01-01_s20-kopie 1 rs4350140
dbSNP Clinvar
1918488 17829.85 A G PASS 1/1 670 None None None 0.63059 0.63060 0.35962 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs3795280
dbSNP Clinvar
1916890 11168.43 C T PASS 0/1 1008 None None None 0.43850 0.43850 0.41041 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs16824588
dbSNP Clinvar
1900232 9784.56 T C PASS 1/1 347 None None None 0.38778 0.38780 0.43514 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs35269416
dbSNP Clinvar
1900186 4591.62 T C PASS 0/1 428 None None None 0.15395 0.15400 0.16325 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs145742571,rs61233860
dbSNP Clinvar
1900106 9121.73 T TCTC PASS 0/1 425 None None None 0.00180 0.19910 0.22042 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 . 156495521 2141.2 CAAAA C,... LowVariantFreq;R8 1/2 316 None None None None None None None None None IQGAP3|0.099380714|51.29%
View 20166-01-01_s20-kopie 1 rs7523728
dbSNP Clinvar
1895177 6972.97 C T PASS 0/1 600 None None None 0.16653 0.16650 0.21545 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs6427315
dbSNP Clinvar
156496188 22563.43 A G PASS 1/1 809 None None None 0.93830 0.93830 None None None None None None IQGAP3|0.099380714|51.29%
View 20166-01-01_s20-kopie 1 rs746505
dbSNP Clinvar
156500128 7565.58 T C PASS 1/1 233 None None None 0.45367 0.45370 0.29617 None None None None None None IQGAP3|0.099380714|51.29%
View 20166-01-01_s20-kopie 1 rs947663
dbSNP Clinvar
156536353 12693.8 A G PASS 1/1 449 None None None 0.95986 0.95990 0.04244 None None None None None None IQGAP3|0.099380714|51.29%
View 20166-01-01_s20-kopie 1 rs3838975,rs796266880
dbSNP Clinvar
1887111 13930.91 GC G PASS 0/1 839 None None None 0.18690 0.18690 0.21949 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs139735565
dbSNP Clinvar
1887091 14098.08 CG C PASS 0/1 832 None None None 0.18810 0.18810 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs28548017
dbSNP Clinvar
1887019 8918.51 A G PASS 0/1 766 None None None 0.79772 0.79770 0.19151 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs3795290
dbSNP Clinvar
1886859 10164.02 C T PASS 0/1 828 None None None 0.18750 0.18750 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs2748975
dbSNP Clinvar
1886519 8745.68 C A PASS 0/1 910 MOTIF[MA0062.2:Gabp] MODIFIER 0.60743 0.60740 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs2748976
dbSNP Clinvar
1886501 219.54 C A LowVariantFreq 0/1 997 MOTIF[MA0062.2:Gabp] MODIFIER None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs2803286
dbSNP Clinvar
1886385 10817.38 T C PASS 0/1 987 None None None 0.81010 0.81010 0.18966 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs201662806
dbSNP Clinvar
1886346 10200.41 G C PASS 0/1 879 None None None None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs138344349
dbSNP Clinvar
1886344 20536.56 A ACAG PASS 0/1 955 None None None None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs2803287
dbSNP Clinvar
1886222 9255.08 T G PASS 0/1 857 None None None 0.81030 0.81030 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs4648738
dbSNP Clinvar
1886220 9358.0 C T PASS 0/1 859 None None None 0.37500 0.37500 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs112927199,rs74473635
dbSNP Clinvar
1886204 19302.23 A AGAGT PASS 0/1 718 None None None 0.37021 0.37020 0.31393 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs2474455
dbSNP Clinvar
1885055 6923.21 C T PASS 0/1 807 None None None 0.56889 0.56890 0.36816 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 . 1884735 494.69 CT C LowVariantFreq;R8 0/1 316 None None None None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs6427319
dbSNP Clinvar
156539154 17707.64 T C PASS 1/1 699 None None None 0.99082 0.99080 0.01084 None None None None None None IQGAP3|0.099380714|51.29%
View 20166-01-01_s20-kopie 1 rs2501320
dbSNP Clinvar
159860259 6919.56 G A PASS 0/1 557 None None None 0.18910 0.18910 0.26880 None None None None None None CFAP45|0.081179858|54.94%
View 20166-01-01_s20-kopie 1 rs10927386
dbSNP Clinvar
245245378 2189.58 T C PASS 0/1 272 None None None 0.30172 0.30170 0.35860 None None None None None None EFCAB2|0.09874582|51.4%
View 20166-01-01_s20-kopie 1 rs1047707
dbSNP Clinvar
245251020 5250.6 G T PASS 0/1 443 None None None 0.28974 0.28970 None None None None None None EFCAB2|0.09874582|51.4%
View 20166-01-01_s20-kopie 1 rs2748981
dbSNP Clinvar
1873453 5144.99 G A PASS 0/1 546 None None None 0.59245 0.59250 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs4658695
dbSNP Clinvar
245251140 5877.54 T G PASS 1/1 222 None None None 0.94129 0.94130 None None None None None None EFCAB2|0.09874582|51.4%
View 20166-01-01_s20-kopie 1 rs2803348
dbSNP Clinvar
1854109 8732.75 A G PASS 0/1 729 None None None 0.59884 0.59880 0.46809 None None None None None None CFAP74|0.001720148|91.8%
View 20166-01-01_s20-kopie 1 rs113294876,rs3039777
dbSNP Clinvar
1853615 58640.46 T TCTGA PASS 1/1 885 None None None 0.99980 0.99980 None None None None None None CFAP74|0.001720148|91.8%
  • Page 1 of 1