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 GROUPS:

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 EXCLUDE GROUPS:

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SELECT YOUR DISEASES:
OMIM:
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MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

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EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

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CADD

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+ Genes 1

Genes:
IL13,

+ Genes associated with diseases 1

Genes at Omim

IL13,
IL13 {Allergic rhinitis, susceptibility to}, 607154 (3)
{Asthma, susceptibility to}, 600807 (3)

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 9
Number of Genes: 1

Export to: CSV
  • Page 1 of 1

IL13
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 6-na1287 both 5 rs20541
dbSNP Clinvar 		131995964 32738.77 A G . 0/1 8865 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.73003 0.73000 0.18730 0.28 0.00 None None None None None None IL13|0.004162767|86.79%
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 6-na1287 both 5 rs6596473
dbSNP Clinvar 		138710576 32738.77 G C . 0/1 7178 None None None 0.53255 0.53250 None None None None None None SLC23A1|0.143963747|43.87%
View 6-na1287 both 5 rs1295686
dbSNP Clinvar 		131995843 32738.77 T C . 0/1 8944 None None None 0.57808 0.57810 0.34992 None None None None None None IL13|0.004162767|86.79%
View 6-na1287 both 5 rs1837253
dbSNP Clinvar 		110401872 32738.77 T C . 0/1 3839 None None None 0.61781 0.61780 None None None None None None None
View 6-na1287 both 5 rs11742570
dbSNP Clinvar 		40410584 32738.77 T C . 0/1 3581 None None None 0.45707 0.45710 None None None None None None None
View 6-na1287 both 5 rs1173771
dbSNP Clinvar 		32815028 32738.77 A G . 0/1 4077 None None None 0.66094 0.66090 None None None None None None None
View 6-na1287 both 5 rs401681
dbSNP Clinvar 		1322087 32738.77 C T . 0/1 9613 None None None 0.41074 0.41070 None None None None None None CLPTM1L|0.070898112|57.26%
View 6-na1287 both 5 rs294958
dbSNP Clinvar 		151568099 32738.77 A G . 0/1 2739 None None None 0.65256 0.65260 None None None None None None None
View 6-na1287 both 5 rs2736100
dbSNP Clinvar 		1286516 32738.77 C A . 1/1 6174 None None None 0.51538 0.51540 None None None None None None TERT|0.441954309|18.57%
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