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1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

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EXCLUDE VARIANTS WITHOUT SIFT SCORE
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MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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Genes at Omim

ANK3, ANKRD26, ARMC4, BICC1, BMS1, CACNB2, CHAT, CTNNA3, CUBN, DHTKD1, EGR2, ERCC6, FRMD4A, GATA3, ITGA8, MAP3K8, MTPAP, MYO3A, OPTN, PCDH15, PHYH, RET, YME1L1, ZNF365,
ANK3 ?Mental retardation, autosomal recessive, 37, 615493 (3)
ANKRD26 Thrombocytopenia 2, 188000 (3)
ARMC4 Ciliary dyskinesia, primary, 23, 615451 (3)
BICC1 {Renal dysplasia, cystic, susceptibility to}, 601331 (3)
BMS1 ?Aplasia cutis congenita, nonsyndromic, 107600 (3)
CACNB2 Brugada syndrome 4, 611876 (3)
CHAT Myasthenic syndrome, congenital, 6, presynaptic, 254210 (3)
CTNNA3 Arrhythmogenic right ventricular dysplasia, familial, 13, 615616 (3)
CUBN Megaloblastic anemia-1, Finnish type, 261100 (3)
DHTKD1 2-aminoadipic 2-oxoadipic aciduria, 204750 (3)
?Charcot-Marie-Tooth disease, axonal, type 2Q, 615025 (3)
EGR2 Charcot-Marie-Tooth disease, type 1D, 607678 (3)
Hypomyelinating neuropathy, congenital, 1, 605253 (3)
Dejerine-Sottas disease, 145900 (3)
ERCC6 Cerebrooculofacioskeletal syndrome 1, 214150 (3)
{Lung cancer, susceptibility to}, 211980 (3)
{Macular degeneration, age-related, susceptibility to, 5}, 613761 (3)
Cockayne syndrome, type B, 133540 (3)
De Sanctis-Cacchione syndrome, 278800 (3)
Premature ovarian failure 11, 616946 (3)
UV-sensitive syndrome 1, 600630 (3)
FRMD4A ?Corpus callosum, agenesis of, with facial anomalies and cerebellar ataxia, 616819 (3)
GATA3 Hypoparathyroidism, sensorineural deafness, and renal dysplasia, 146255 (3)
ITGA8 Renal hypodysplasia/aplasia 1, 191830 (3)
MAP3K8 Lung cancer, somatic, 211980 (3)
MTPAP ?Spastic ataxia 4, autosomal recessive, 613672 (3)
MYO3A Deafness, autosomal recessive 30, 607101 (3)
OPTN {Glaucoma, normal tension, susceptibility to}, 606657 (3)
Amyotrophic lateral sclerosis 12, 613435 (3)
Glaucoma 1, open angle, E, 137760 (3)
PCDH15 Deafness, autosomal recessive 23, 609533 (3)
Usher syndrome, type 1D/F digenic, 601067 (3)
Usher syndrome, type 1F, 602083 (3)
PHYH Refsum disease, 266500 (3)
RET {Hirschsprung disease, protection against}, 142623 (3)
{Hirschsprung disease, susceptibility to, 1}, 142623 (3)
Central hypoventilation syndrome, congenital, 209880 (3)
Medullary thyroid carcinoma, 155240 (3)
Multiple endocrine neoplasia IIA, 171400 (3)
Multiple endocrine neoplasia IIB, 162300 (3)
Pheochromocytoma, 171300 (3)
YME1L1 ?Optic atrophy 11, 617302 (3)
ZNF365 {Nephrolithiasis, uric acid, susceptibility to}, 605990 (3)

Genes at Clinical Genomics Database

ANKRD26, ARMC4, BICC1, BMS1, CACNB2, CHAT, CTNNA3, CUBN, DHTKD1, EGR2, ERCC6, FRMD4A, GATA3, ITGA8, MASTL, MTPAP, MYO3A, OPTN, PCDH15, PHYH, RET,
ANKRD26 Thrombocytopenia 2
ARMC4 Ciliary dyskinesia, primary, 23
BICC1 Renal dysplasia, cystic, susceptibility to
BMS1 Aplasia cutis congenita, nonsyndromic
CACNB2 Brugada syndrome 4
CHAT Myasthenic syndrome, congenital 6, presynaptic
CTNNA3 Arrhythmogenic right ventricular dysplasia, familial, 13
CUBN Megaloblastic anemia-1, Finnish type
DHTKD1 Charcot-Marie-Tooth disease, type 2Q
2-aminoadipic and 2-oxoadipic aciduria
EGR2 Charcot-Marie-Tooth disease, demyelinating, type 1D
Neuropathy, congenital hypomyelinating, 1
Dejerine-Sottas disease
ERCC6 Xeroderma Pigmentosum-Cockayne Syndrome
De Sanctis-Cacchione syndrome
Premature ovarian failure 11 (AD)
FRMD4A Corpus callosum, agenesis of, with facial anomalies and cerebellar ataxia (Fine-Flusser syndrome)
GATA3 Hypoparathyroidism, sensorineural deafness, and renal dysplasia
ITGA8 Renal agenesis, bilateral
MASTL Thrombocytopenia 2
MTPAP Spastic ataxia 4, autosomal recessive
MYO3A Deafness, autosomal recessive 30
OPTN Glaucoma, normal tension, susceptibility to
Glaucoma 1, open angle, E
PCDH15 Deafness, autosomal recessive 23
Usher syndrome, type 1F
Usher syndrome, type 1D/F, digenic
PHYH Refsum disease
RET Central hypoventilation syndrome, congenital
Multiple endocrine neoplasia, type IIA
Multiple endocrine neoplasia IIB
Medullary thyroid carcinoma, familial
Pheochromocytoma
Hirschsprung disease, susceptibility to 1

Genes at HGMD

Summary

Number of Variants: 1000
Number of Genes: 112

Export to: CSV

ACBD5

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs7918793
dbSNP Clinvar
27497191 39.1 G A . 0/1 87 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.07288 0.07288 0.05951 0.05 0.33 None None None None None None None

AGAP6

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs61848260
dbSNP Clinvar
51748684 40.8 G A . 0/1 269 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.50020 0.50020 0.17 0.00 None None None None None None None

ANK3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs2297979
dbSNP Clinvar
61965625 48.9 A G . 0/1 81 SYNONYMOUS_CODING LOW SILENT 0.15156 0.15160 0.18176 None None None None None None None
View xah 10 rs41274674
dbSNP Clinvar
61832626 49.5 G A . 0/1 74 SYNONYMOUS_CODING LOW SILENT 0.02756 0.02756 0.04821 None None None None None None None

ANKRD26

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs2274741
dbSNP Clinvar
27303605 50.0 A T . 0/1 142 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.31729 0.31730 0.17173 1.00 0.00 None None None None None None None
View xah 10 rs10829163
dbSNP Clinvar
27317840 48.3 C T . 0/1 153 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.31729 0.31730 0.17227 1.00 0.00 None None None None None None None
View xah 10 rs7897309
dbSNP Clinvar
27389197 341.2 T C . 1/1 98 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.94469 0.94470 0.10655 1.00 0.00 None None None None None None None
View xah 10 rs79092403
dbSNP Clinvar
27382639 50.0 T C . 0/1 177 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.01038 0.01038 0.00922 0.68 0.01 None None None None None None None
View xah 10 rs2297145
dbSNP Clinvar
27381349 50.0 T C . 0/1 179 SYNONYMOUS_CODING LOW SILENT 0.34665 0.34660 0.21011 None None None None None None None

ANKRD30A

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs57914746
dbSNP Clinvar
37505179 50.0 T C . 0/1 88 SYNONYMOUS_CODING LOW SILENT 0.15875 0.15870 0.21071 None None None None None None None
View xah 10 rs1209750
dbSNP Clinvar
37488689 48.0 G C . 0/1 92 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.48223 0.48220 0.40331 0.27 0.02 None None None None None None None
View xah 10 rs34552277
dbSNP Clinvar
37505159 50.0 G A . 0/1 82 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.22764 0.22760 0.28179 0.16 0.04 None None None None None None None
View xah 10 rs1148259
dbSNP Clinvar
37508450 50.0 A C . 0/1 117 SYNONYMOUS_CODING LOW SILENT 0.53355 0.53350 0.40857 None None None None None None None

ANTXRL

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs61845226
dbSNP Clinvar
47669277 48.4 C G . 0/1 44 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.34285 0.34290 0.14 0.63 None None None None None None None
View xah 10 rs2999446
dbSNP Clinvar
47682811 50.0 G A . 0/1 34 SYNONYMOUS_CODING LOW SILENT 0.14457 0.14460 None None None None None None None
View xah 10 rs10906952
dbSNP Clinvar
47701275 139.4 G A . 1/1 31 SYNONYMOUS_CODING LOW SILENT 0.27596 0.27600 None None None None None None None
View xah 10 rs4409768
dbSNP Clinvar
47668707 49.0 T C . 0/1 65 SYNONYMOUS_CODING LOW SILENT 0.34305 0.34310 None None None None None None None

ARHGAP21

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs3748222
dbSNP Clinvar
24908686 231.9 T C . 1/1 63 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.43830 0.43830 0.49047 1.00 0.00 None None None None None None None
View xah 10 rs10734053
dbSNP Clinvar
24879281 185.1 A G . 1/1 46 None None None 1.00000 1.00000 None None None None None None None
View xah 10 rs1127893
dbSNP Clinvar
24873369 153.7 C G . 1/1 38 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00100 0.49260 0.49347 0.32 0.00 None None None None None None None

ARHGAP22

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs3827681
dbSNP Clinvar
49659637 50.0 T C . 0/1 34 None None None 0.50280 0.50280 0.00 None None None None None None None
View xah 10 rs3853761
dbSNP Clinvar
49667795 209.1 T C . 1/1 54 SYNONYMOUS_CODING LOW SILENT 0.90196 0.90200 0.10449 None None None None None None None
View xah 10 rs10776601
dbSNP Clinvar
49659559 272.1 C T . 1/1 75 None None None 0.79193 0.79190 0.68 0.00 None None None None None None None

ARMC3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs11817610
dbSNP Clinvar
23297301 224.1 C T . 1/1 73 SPLICE_SITE_REGION+SYNONYMOUS_CODING LOW SILENT 0.50000 0.50000 0.47916 None None None None None None None

ARMC4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs7893462
dbSNP Clinvar
28228865 223.9 A G . 1/1 59 SYNONYMOUS_CODING LOW SILENT 0.53315 0.53310 0.49193 None None None None None None None
View xah 10 rs61729354
dbSNP Clinvar
28273183 50.0 A T . 0/1 70 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00659 0.00659 0.00546 1.00 0.00 None None None None None None None

ASAH2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs7097319
dbSNP Clinvar
52005153 50.0 A G . 0/1 129 SYNONYMOUS_CODING LOW SILENT 0.33207 0.33210 0.23489 None None None None None None None
View xah 10 rs3739979
dbSNP Clinvar
52002980 50.0 T G . 0/1 50 SYNONYMOUS_CODING LOW SILENT 0.30431 0.30430 0.20898 None None None None None None None

ASAH2C

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs3739968
dbSNP Clinvar
48003992 292.0 C T . 1/1 101 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.34665 0.34660 1.00 0.00 None None None None None None None

BEND7

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs2251555
dbSNP Clinvar
13534851 20.7 A G . 0/1 38 SYNONYMOUS_CODING LOW SILENT 0.48063 0.48060 0.44671 None None None None None None None

BICC1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs4344442
dbSNP Clinvar
60577393 50.0 T C . 0/1 114 SYNONYMOUS_CODING LOW SILENT 0.73742 0.73740 0.26203 None None None None None None None
View xah 10 rs4948550
dbSNP Clinvar
60588553 50.0 T C . 0/1 59 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.60743 0.60740 0.37952 1.00 0.00 None None None None None None None
View xah 10 rs9416746
dbSNP Clinvar
60573753 50.0 G T . 0/1 171 None None None 0.74661 0.74660 0.24881 0.11 0.00 None None None None None None None

BMS1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs787795
dbSNP Clinvar
43292647 50.0 A G . 0/1 64 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.18051 0.18050 0.16404 0.16 0.00 None None None None None None None

C10orf107

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs1992625
dbSNP Clinvar
63520698 520.8 T C . 1/1 158 SYNONYMOUS_CODING LOW SILENT 0.87201 0.87200 0.18156 None None None None None None None

C10orf128

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs9418839
dbSNP Clinvar
50374819 42.4 T C . 0/1 35 None None None 0.39097 0.39100 None None None None None None None

C10orf25

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs12269028
dbSNP Clinvar
45496120 50.0 A T . 0/1 91 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.46046 0.46050 0.46040 0.00 0.65 None None None None None None None

C10orf53

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs4838554
dbSNP Clinvar
50916542 468.0 C T . 1/1 153 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.39097 0.39100 0.47255 0.97 0.00 None None None None None None None
View xah 10 rs1133837
dbSNP Clinvar
50901938 49.9 C T . 0/1 68 SPLICE_SITE_REGION+SYNONYMOUS_CODING LOW SILENT 0.35304 0.35300 0.44049 None None None None None None None
View xah 10 rs1258236
dbSNP Clinvar
50916484 302.4 A G . 1/1 99 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.80811 0.80810 0.17761 1.00 0.00 None None None None None None None

C10ORF68

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs73255967
dbSNP Clinvar
33067958 45.5 A G . 0/1 78 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.05212 0.05212 1.00 0.00 None None None None None None None
View xah 10 rs1418538
dbSNP Clinvar
33143396 418.8 G A . 1/1 124 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.98363 0.98360 0.01793 1.00 0.00 None None None None None None None
View xah 10 rs4448627
dbSNP Clinvar
33123824 319.6 G C . 1/1 91 NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION MODERATE MISSENSE 0.98363 0.98360 0.01772 1.00 0.00 None None None None None None None
View xah 10 rs1414548
dbSNP Clinvar
33018351 398.0 G C . 1/1 117 SYNONYMOUS_CODING LOW SILENT 0.91653 0.91650 0.08685 None None None None None None None
View xah 10 rs1762526
dbSNP Clinvar
32974969 354.8 A G . 1/1 103 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.91653 0.91650 0.08776 1.00 0.00 None None None None None None None

C10orf71

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs10857472
dbSNP Clinvar
50534599 50.0 G A . 0/1 52 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.32967 0.32970 0.37942 0.18 0.51 None None None None None None None
View xah 10 rs7921186
dbSNP Clinvar
50532683 488.1 T C . 1/1 147 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.96286 0.96290 0.03362 1.00 0.00 None None None None None None None
View xah 10 rs12411843
dbSNP Clinvar
50534862 50.0 T C . 0/1 25 SYNONYMOUS_CODING LOW SILENT 0.30371 0.30370 0.27530 None None None None None None None
View xah 10 rs2377940
dbSNP Clinvar
50533617 184.9 T C . 1/1 46 SYNONYMOUS_CODING LOW SILENT 0.87201 0.87200 0.08782 None None None None None None None
View xah 10 rs10857471
dbSNP Clinvar
50533776 49.0 C G . 0/1 47 SYNONYMOUS_CODING LOW SILENT 0.34685 0.34680 None None None None None None None

CACNB2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs2228645
dbSNP Clinvar
18828371 49.2 C T . 0/1 201 SYNONYMOUS_CODING LOW SILENT 0.23722 0.23720 0.17753 None None None None None None None

CAMK1D

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs1757051
dbSNP Clinvar
12867598 42.8 C G . 0/1 37 SYNONYMOUS_CODING LOW SILENT 0.77396 0.77400 0.26003 None None None None None None None

CASC10

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs11012724
dbSNP Clinvar
21784722 23.8 C G . 0/1 56 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00300 0.00300 0.00309 0.14 0.00 None None None None None None None

CCDC6

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs7899254
dbSNP Clinvar
61552762 50.0 C T . 0/1 64 SYNONYMOUS_CODING LOW SILENT 0.00080 0.05911 0.05744 None None None None None None None
View xah 10 rs1053266
dbSNP Clinvar
61552692 47.1 G T . 0/1 21 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.43530 0.43530 0.42234 0.12 0.99 None None None None None None None
View xah 10 rs1053265
dbSNP Clinvar
61552774 44.6 C T . 0/1 72 SYNONYMOUS_CODING LOW SILENT 0.61162 0.61160 0.34746 None None None None None None None

CCDC7

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs73251552
dbSNP Clinvar
32780902 49.8 A C . 0/1 69 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.04513 0.04513 0.05125 0.01 0.81 None None None None None None None

CCNY

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs3802509
dbSNP Clinvar
35772402 50.0 G A . 0/1 93 SYNONYMOUS_CODING LOW SILENT 0.45707 0.45710 0.42227 None None None None None None None

CDNF

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs61738953
dbSNP Clinvar
14862082 49.7 C G . 0/1 72 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.01358 0.01358 0.02991 0.00 1.00 None None None None None None None

CELF2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs2277212
dbSNP Clinvar
11299735 208.4 A T . 1/1 54 SYNONYMOUS_CODING LOW SILENT 0.78115 0.78120 0.25839 None None None None None None None
View xah 10 rs2246449
dbSNP Clinvar
11356160 50.0 C T . 0/1 123 SYNONYMOUS_CODING LOW SILENT 0.45108 0.45110 0.35622 None None None None None None None

CHAT

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs1880676
dbSNP Clinvar
50824117 50.0 G A . 0/1 44 None None None 0.16154 0.16150 0.18757 0.43 0.13 None None None None None None None
View xah 10 rs4838544
dbSNP Clinvar
50856652 424.4 G A . 1/1 126 NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION MODERATE MISSENSE 0.96645 0.96650 0.03898 1.00 0.00 None None None None None None None
View xah 10 rs8178992
dbSNP Clinvar
50863147 50.0 T C . 0/1 175 SYNONYMOUS_CODING LOW SILENT 0.79353 0.79350 0.16016 None None None None None None None
View xah 10 rs3810950
dbSNP Clinvar
50824619 47.8 G A . 0/1 149 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.16054 0.16050 0.18238 0.44 0.01 None None None None None None None

CSGALNACT2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs2435381
dbSNP Clinvar
43678796 50.0 C T . 0/1 172 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.15855 0.15850 0.19983 0.31 0.08 None None None None None None None

CSTF2T

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs3740228
dbSNP Clinvar
53458047 49.8 A G . 0/1 104 SYNONYMOUS_CODING LOW SILENT 0.24980 0.24980 0.21975 None None None None None None None
View xah 10 rs2292828
dbSNP Clinvar
53458998 45.9 A G . 0/1 120 SYNONYMOUS_CODING LOW SILENT 0.31570 0.31570 0.28425 None None None None None None None
View xah 10 rs3824686
dbSNP Clinvar
53458167 38.4 C T . 0/1 69 SYNONYMOUS_CODING LOW SILENT 0.09085 0.09085 0.06251 None None None None None None None

CTNNA3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs61737718
dbSNP Clinvar
68138987 49.1 G A . 0/1 201 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.02716 0.02716 0.02906 0.13 0.01 None None None None None None None
View xah 10 rs10997034
dbSNP Clinvar
68040240 49.9 G T . 0/1 112 SYNONYMOUS_CODING LOW SILENT 0.06909 0.06909 0.04806 None None None None None None None
View xah 10 rs4548513
dbSNP Clinvar
68040325 49.4 C T . 0/1 111 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.48502 0.48500 0.46655 1.00 0.00 None None None None None None None

CUBN

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs1801232
dbSNP Clinvar
16870912 50.0 G T . 0/1 258 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00599 0.00599 0.05567 0.15 0.19 None None None None None None None
View xah 10 rs1801225
dbSNP Clinvar
17113563 520.1 C T . 1/1 158 SYNONYMOUS_CODING LOW SILENT 0.35603 0.35600 0.33569 None None None None None None None
View xah 10 rs703064
dbSNP Clinvar
16882518 529.7 T C . 1/1 161 SYNONYMOUS_CODING LOW SILENT 0.63598 0.63600 0.28518 None None None None None None None
View xah 10 rs2796835
dbSNP Clinvar
16943371 1263.9 G C . 1/1 406 NON_SYNONYMOUS_CODING MODERATE MISSENSE 1.00000 1.00000 0.00008 1.00 0.00 None None None None None None None
View xah 10 rs3740165
dbSNP Clinvar
16949550 45.7 T C . 0/1 170 SYNONYMOUS_CODING LOW SILENT 0.10643 0.10640 0.08173 None None None None None None None
View xah 10 rs1276712
dbSNP Clinvar
16967401 490.6 C T . 1/1 148 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.99341 0.99340 0.00038 1.00 0.00 None None None None None None None
View xah 10 rs41289313
dbSNP Clinvar
17157572 871.7 G A . 1/1 292 SYNONYMOUS_CODING LOW SILENT 0.08466 0.08466 0.06266 None None None None None None None
View xah 10 rs1801234
dbSNP Clinvar
16979661 50.0 T C . 0/1 185 SYNONYMOUS_CODING LOW SILENT 0.54133 0.54130 0.48916 None None None None None None None
View xah 10 rs1801231
dbSNP Clinvar
17024503 50.0 G A . 0/1 120 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.61342 0.61340 0.25127 0.61 0.05 None None None None None None None
View xah 10 rs1801229
dbSNP Clinvar
17024615 46.4 A T . 0/1 103 SYNONYMOUS_CODING LOW SILENT 0.61382 0.61380 0.25119 None None None None None None None
View xah 10 rs1801222
dbSNP Clinvar
17156151 651.9 A G . 1/1 202 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.79932 0.79930 0.30155 1.00 0.00 None None None None None None None

DHTKD1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs2062988
dbSNP Clinvar
12143105 49.3 C G . 0/1 55 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.72404 0.72400 0.25796 1.00 0.00 None None None None None None None
View xah 10 rs1615510
dbSNP Clinvar
12148286 257.0 T C . 1/1 70 SYNONYMOUS_CODING LOW SILENT 0.96406 0.96410 0.04052 None None None None None None None
View xah 10 rs1701472
dbSNP Clinvar
12148259 224.0 A C . 1/1 59 SYNONYMOUS_CODING LOW SILENT 0.95407 0.95410 0.05052 None None None None None None None
View xah 10 rs1722462
dbSNP Clinvar
12149939 178.5 C T . 1/1 44 SYNONYMOUS_CODING LOW SILENT 0.90316 0.90320 0.13763 None None None None None None None
View xah 10 rs1279138
dbSNP Clinvar
12111090 328.9 T C . 1/1 94 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.97025 0.97020 0.03252 1.00 0.00 None None None None None None None
View xah 10 rs3740015
dbSNP Clinvar
12131081 50.0 T G . 0/1 95 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.48443 0.48440 0.48009 1.00 0.00 None None None None None None None

EBLN1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs2243897
dbSNP Clinvar
22498209 49.6 A G . 0/1 86 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.31390 0.31390 1.00 0.00 None None None None None None None
View xah 10 rs10466081
dbSNP Clinvar
22498450 48.2 A C . 0/1 110 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.09385 0.09385 0.11 0.17 None None None None None None None
View xah 10 rs838759
dbSNP Clinvar
22498468 50.0 C T . 0/1 92 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.22624 0.22620 0.08 0.01 None None None None None None None
View xah 10 rs3059425
dbSNP Clinvar
22498484 50.0 C CAGA . 0/1 77 CODON_CHANGE_PLUS_CODON_INSERTION MODERATE 0.32907 0.32910 None None None None None None None

ECHDC3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs4750090
dbSNP Clinvar
11789382 319.9 G A . 1/1 91 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.91354 0.91350 0.08927 0.06 0.85 None None None None None None None
View xah 10 rs7910140
dbSNP Clinvar
11797467 226.9 G A . 1/1 60 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.91594 0.91590 0.08781 1.00 0.02 None None None None None None None
View xah 10 rs4750091
dbSNP Clinvar
11789405 367.5 G A . 1/1 107 SYNONYMOUS_CODING LOW SILENT 0.92232 0.92230 0.07550 None None None None None None None
View xah 10 rs7899215
dbSNP Clinvar
11797436 187.6 T C . 1/1 47 PROTEIN_STRUCTURAL_INTERACTION_LOCUS HIGH 0.93131 0.93130 0.06366 None None None None None None None

EGR2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs224083
dbSNP Clinvar
64573771 409.9 C T . 1/1 122 SYNONYMOUS_CODING LOW SILENT 0.98602 0.98600 0.01784 None None None None None None None

ERCC6

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View xah 10 rs2229760
dbSNP Clinvar
50681033 439.9 G A . 1/1 131 SYNONYMOUS_CODING LOW SILENT 0.25419 0.25420 0.32377 None None None None None None None
View xah 10 rs2228524
dbSNP Clinvar
50740876 398.2 G C . 1/1 117 SYNONYMOUS_CODING LOW SILENT 0.59086 0.59090 0.37244 None None None None None None None