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SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
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EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
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EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

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EXCLUDE VARIANTS WITHOUT SIFT SCORE
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EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
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EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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Genes at Omim

ALMS1, ANLN, APOL1, CFH, COL4A3, COL4A4, COQ2, COQ6, COQ7, COQ9, CRB2, CUBN, ITGB4, KANK1, MEFV, MYH9, NPHS1, NUP205, PLCE1, TRPC6, TTC21B,
ALMS1 Alstrom syndrome, 203800 (3)
ANLN Focal segmental glomerulosclerosis 8, 616032 (3)
APOL1 {End-stage renal disease, nondiabetic, susceptibility to}, 612551 (3)
{Glomerulosclerosis, focal segmental, 4, susceptibility to}, 612551 (3)
CFH Basal laminar drusen, 126700 (3)
{Hemolytic uremic syndrome, atypical, susceptibility to, 1}, 235400 (3)
{Macular degeneration, age-related, 4}, 610698 (3)
Complement factor H deficiency, 609814 (3)
COL4A3 Alport syndrome 2, autosomal recessive, 203780 (3)
Alport syndrome 3, autosomal dominant, 104200 (3)
Hematuria, benign familial, 141200 (3)
COL4A4 Alport syndrome 2, autosomal recessive, 203780 (3)
Hematuria, familial benign, 141200 (3)
COQ2 Coenzyme Q10 deficiency, primary, 1, 607426 (3)
{Multiple system atrophy, susceptibility to}, 146500 (3)
COQ6 Coenzyme Q10 deficiency, primary, 6, 614650 (3)
COQ7 ?Coenzyme Q10 deficiency, primary, 8, 616733 (3)
COQ9 Coenzyme Q10 deficiency, primary, 5, 614654 (3)
CRB2 Focal segmental glomerulosclerosis 9, 616220 (3)
Ventriculomegaly with cystic kidney disease, 219730 (3)
CUBN Megaloblastic anemia-1, Finnish type, 261100 (3)
ITGB4 Epidermolysis bullosa of hands and feet, 131800 (3)
Epidermolysis bullosa, junctional, non-Herlitz type, 226650 (3)
Epidermolysis bullosa, junctional, with pyloric atresia, 226730 (3)
KANK1 Cerebral palsy, spastic quadriplegic, 2, 612900 (3)
MEFV Familial Mediterranean fever, AD, 134610 (3)
Familial Mediterranean fever, AR, 249100 (3)
MYH9 Deafness, autosomal dominant 17, 603622 (3)
Macrothrombocytopenia and granulocyte inclusions with or without nephritis or sensorineural hearing loss, 155100 (3)
NPHS1 Nephrotic syndrome, type 1, 256300 (3)
NUP205 ?Nephrotic syndrome, type 13, 616893 (3)
PLCE1 Nephrotic syndrome, type 3, 610725 (3)
TRPC6 Glomerulosclerosis, focal segmental, 2, 603965 (3)
TTC21B Nephronophthisis 12, 613820 (3)
Short-rib thoracic dysplasia 4 with or without polydactyly, 613819 (3)

Genes at Clinical Genomics Database

ADCK4, ALMS1, ANLN, CFH, COL4A3, COL4A4, COQ2, COQ6, COQ7, COQ9, CRB2, CUBN, ITGB4, KANK1, MEFV, MYH9, NPHS1, NUP205, PLCE1, TRPC6, TTC21B,
ADCK4 Nephrotic syndrome, type 9
ALMS1 Alstrom syndrome
ANLN Focal segmental glomerulosclerosis 8
CFH Hemolytic uremic syndrome, atypical
Complement factor H deficiency
COL4A3 Alport syndrome, autosomal dominant
Alport syndrome, autosomal recessive
COL4A4 Alport syndrome, autosomal recessive
COQ2 Coenzyme Q10 deficiency 1
COQ6 Coenzyme Q10 deficiency, primary 6
COQ7 Coenzyme Q10 deficiency, primary 8
COQ9 Coenzyme Q10 deficiency 5
CRB2 Focal segmental glomerulosclerosis 9
Ventriculomegaly with cystic kidney disease
CUBN Megaloblastic anemia-1, Finnish type
ITGB4 Epidermolysis bullosa, junctional, with pyloric atresia
Epidermolysis bullosa, junctional, non-Herlitz type
Epidermolysis bullosa simplex, Weber-Cockayne type
KANK1 Cerebral palsy, spastic quadriplegic, 2
MEFV Familial Mediterranean fever
MYH9 Sebastian syndrome
May-Hegglin anomaly
Fechtner syndrome
Epstein syndrome
Macrothrombocytopenia and progressive sensorineural deafness
NPHS1 Nephrotic syndrome, type 1
NUP205 Nephrotic syndrome, type 13
PLCE1 Nephrotic syndrome, type 3
TRPC6 Focal segmental glomerulosclerosis 2
TTC21B Nephronophthisis 12
Short-rib thoracic dysplasia 4 with or without polydactyly

Genes at HGMD

Summary

Number of Variants: 56
Number of Genes: 25

Export to: CSV
  • Page 1 of 1

ADCK4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 19 rs3865452
dbSNP Clinvar
41211056 384.77 T C ReadPosRankSumTest 0/1 34 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.47744 0.47740 0.45248 0.53 0.00 None None None None None None ADCK4|0.043749388|64.59%

ALMS1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 2 rs1052161
dbSNP Clinvar
73828538 3801.77 G A PASS 1/1 123 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.58227 0.58230 0.46339 0.00 None None None None None None ALMS1|0.012791041|78.65%
View sample_hardfiltered 2 rs2037814
dbSNP Clinvar
73675669 1871.77 T G PASS 1/1 60 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.87220 0.87220 0.11943 0.00 None None None None None None ALMS1|0.012791041|78.65%
View sample_hardfiltered 2 rs546111188
dbSNP Clinvar
73678899 913.77 A G ReadPosRankSumTest 0/1 84 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00339 0.00340 0.99 None None None None None None ALMS1|0.012791041|78.65%

ANLN

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 7 rs197367
dbSNP Clinvar
36445856 1098.77 G A ReadPosRankSumTest 0/1 92 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.62061 0.62060 0.46094 1.00 0.00 None None None None None None ANLN|0.180116375|39.04%

APOL1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 22 rs136175
dbSNP Clinvar
36661566 3375.77 G A PASS 1/1 109 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.86422 0.86420 0.15308 0.04 0.00 None None None None None None APOL1|0.000329557|99.31%
View sample_hardfiltered 22 rs136176
dbSNP Clinvar
36661646 4070.77 G A PASS 1/1 130 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.86262 0.86260 0.15101 1.00 0.00 None None None None None None APOL1|0.000329557|99.31%
View sample_hardfiltered 22 rs2239785
dbSNP Clinvar
36661330 2845.77 G A PASS 1/1 95 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.67812 0.67810 0.34715 0.16 0.78 None None None None None None APOL1|0.000329557|99.31%

CFH

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 1 rs800292
dbSNP Clinvar
196642233 1339.77 G A ReadPosRankSumTest 0/1 112 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.46805 0.46810 0.38659 1.00 0.00 None None None None None None CFH|0.021522909|73.44%
View sample_hardfiltered 1 rs1061170
dbSNP Clinvar
196659237 1209.77 C T ReadPosRankSumTest 0/1 103 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.73343 0.73340 0.37567 1.00 0.00 None None None None None None CFH|0.021522909|73.44%

COL4A3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 2 rs6436669
dbSNP Clinvar
228113175 542.77 A G ReadPosRankSumTest 0/1 41 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.79633 0.79630 0.22987 1.00 0.01 None None None None None None COL4A3|0.119573089|47.51%
View sample_hardfiltered 2 rs10178458
dbSNP Clinvar
228111435 662.77 T C ReadPosRankSumTest 0/1 55 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.79673 0.79670 0.22958 1.00 0.01 None None None None None None COL4A3|0.119573089|47.51%
View sample_hardfiltered 2 rs28381984
dbSNP Clinvar
228135631 1412.77 C T ReadPosRankSumTest 0/1 132 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.39996 0.40000 0.38901 0.01 1.00 None None None None None None COL4A3|0.119573089|47.51%
View sample_hardfiltered 2 rs55703767
dbSNP Clinvar
228121101 1496.77 G T ReadPosRankSumTest 0/1 129 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.11582 0.11580 0.16577 0.06 0.16 None None None None None None COL4A3|0.119573089|47.51%

COL4A4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 2 rs2229814
dbSNP Clinvar
227954599 838.77 G A ReadPosRankSumTest 0/1 78 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.54852 0.54850 0.49096 0.87 0.00 None None None None None None COL4A4|0.099677436|51.24%
View sample_hardfiltered 2 rs3752895
dbSNP Clinvar
227886773 295.77 A G ReadPosRankSumTest 0/1 35 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.52616 0.52620 0.47825 0.95 0.00 None None None None None None COL4A4|0.099677436|51.24%
View sample_hardfiltered 2 rs2229813
dbSNP Clinvar
227892720 1009.77 C T ReadPosRankSumTest 0/1 102 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.49301 0.49300 0.45483 1.00 0.00 None None None None None None COL4A4|0.099677436|51.24%
View sample_hardfiltered 2 rs1800517
dbSNP Clinvar
227915832 1925.77 G A ReadPosRankSumTest 0/1 158 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.54732 0.54730 0.48141 0.01 0.20 None None None None None None COL4A4|0.099677436|51.24%

COQ2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 4 rs6818847
dbSNP Clinvar
84205872 3656.77 C A ReadPosRankSumTest 0/1 329 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.64976 0.64980 0.31481 0.33 0.00 None None None None None None COQ2|0.032632343|68.33%

COQ6

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 14 rs2074930
dbSNP Clinvar
74428000 1083.77 A T ReadPosRankSumTest 0/1 112 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.14956 0.14960 0.07981 0.41 0.01 None None None None None None COQ6|0.155475963|42.22%,ENTPD5|0.24144342|32.32%

COQ7

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 16 rs11074359
dbSNP Clinvar
19085298 787.77 C T ReadPosRankSumTest 0/1 68 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.57468 0.57470 0.46244 0.06 0.63 None None None None None None COQ7|0.07755176|55.76%

COQ9

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 16 rs547254482
dbSNP Clinvar
57486832 545.77 T C ReadPosRankSumTest 0/1 91 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00140 0.00140 0.00 0.92 None None None None None None COQ9|0.108502854|49.46%

CRB2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 9 rs2488601
dbSNP Clinvar
126135715 8162.77 A G PASS 1/1 263 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.97624 0.97620 0.02453 0.84 0.00 None None None None None None CRB2|0.035723803|67.22%
View sample_hardfiltered 9 rs2488602
dbSNP Clinvar
126133547 8740.77 T C ReadPosRankSumTest 1/1 293 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.99661 0.99660 0.00277 1.00 0.00 None None None None None None CRB2|0.035723803|67.22%
View sample_hardfiltered 9 rs2808415
dbSNP Clinvar
126125318 2491.77 C A PASS 1/1 79 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.99701 0.99700 0.00277 1.00 0.00 None None None None None None CRB2|0.035723803|67.22%

CUBN

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 10 rs1276712
dbSNP Clinvar
16967401 2797.77 C T PASS 1/1 91 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.99341 0.99340 0.00038 1.00 0.00 None None None None None None CUBN|0.033721807|67.86%
View sample_hardfiltered 10 rs3740168
dbSNP Clinvar
16948390 1072.77 G C ReadPosRankSumTest 0/1 98 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.06749 0.06749 0.01215 0.21 0.10 None None None None None None CUBN|0.033721807|67.86%
View sample_hardfiltered 10 rs2796835
dbSNP Clinvar
16943371 1705.77 G C PASS 1/1 58 NON_SYNONYMOUS_CODING MODERATE MISSENSE 1.00000 1.00000 0.00008 1.00 0.00 None None None None None None CUBN|0.033721807|67.86%
View sample_hardfiltered 10 rs1801232
dbSNP Clinvar
16870912 4199.77 G T PASS 1/1 132 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00599 0.00599 0.05567 0.15 0.19 None None None None None None CUBN|0.033721807|67.86%
View sample_hardfiltered 10 rs1801224
dbSNP Clinvar
17147521 2547.77 G T PASS 1/1 87 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.53435 0.53430 0.41243 0.03 0.21 None None None None None None CUBN|0.033721807|67.86%
View sample_hardfiltered 10 rs1801231
dbSNP Clinvar
17024503 1187.77 G A ReadPosRankSumTest 0/1 94 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.61342 0.61340 0.25127 0.61 0.05 None None None None None None CUBN|0.033721807|67.86%
View sample_hardfiltered 10 rs2271460
dbSNP Clinvar
16961995 942.77 A C ReadPosRankSumTest 0/1 74 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.03375 0.03375 0.00715 0.00 1.00 None None None None None None CUBN|0.033721807|67.86%

FAT1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 4 rs3733414
dbSNP Clinvar
187629770 1226.77 A C ReadPosRankSumTest 0/1 120 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.39896 0.39900 0.45684 0.39 0.03 None None None None None None FAT1|0.058949696|60.16%
View sample_hardfiltered 4 rs367863
dbSNP Clinvar
187629140 1604.77 G C ReadPosRankSumTest 0/1 103 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.69050 0.69050 0.21992 1.00 0.00 None None None None None None FAT1|0.058949696|60.16%
View sample_hardfiltered 4 rs1877731
dbSNP Clinvar
187628398 1476.77 C G ReadPosRankSumTest 0/1 118 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.68910 0.68910 0.22448 1.00 0.00 None None None None None None FAT1|0.058949696|60.16%
View sample_hardfiltered 4 rs11939575
dbSNP Clinvar
187627792 871.77 T C ReadPosRankSumTest 0/1 74 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.74581 0.74580 0.17278 1.00 0.00 None None None None None None FAT1|0.058949696|60.16%
View sample_hardfiltered 4 rs1280097
dbSNP Clinvar
187519206 2205.77 C G PASS 1/1 71 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.99740 0.99740 0.00479 1.00 0.00 None None None None None None FAT1|0.058949696|60.16%
View sample_hardfiltered 4 rs3733413
dbSNP Clinvar
187629538 1023.77 C T ReadPosRankSumTest 0/1 113 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.33886 0.33890 0.46072 0.29 0.09 None None None None None None FAT1|0.058949696|60.16%

ITGB4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 17 rs871443
dbSNP Clinvar
73753503 811.77 T C ReadPosRankSumTest 0/1 64 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.57149 0.57150 0.39643 0.00 0.83 None None None None None None ITGB4|0.346553835|24.38%,GALK1|0.289083483|28.42%

KANK1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 9 rs4465020
dbSNP Clinvar
712060 1081.77 G C ReadPosRankSumTest 0/1 106 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.23522 0.23520 0.28802 0.07 0.09 None None None None None None KANK1|0.107252286|49.74%

KANK4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 1 rs2941679
dbSNP Clinvar
62713224 1418.77 C G PASS 1/1 46 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.98622 0.98620 0.02922 0.94 0.00 None None None None None None KANK4|0.062859636|59.12%
View sample_hardfiltered 1 rs11207949
dbSNP Clinvar
62732421 587.77 T C ReadPosRankSumTest 0/1 57 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.30551 0.30550 0.23743 0.12 0.01 None None None None None None KANK4|0.062859636|59.12%
View sample_hardfiltered 1 rs2258470
dbSNP Clinvar
62728838 4751.77 T C PASS 1/1 108 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.71625 0.71630 0.32539 0.22 0.00 None None None None None None KANK4|0.062859636|59.12%
View sample_hardfiltered 1 rs2666472
dbSNP Clinvar
62728784 2171.77 A G PASS 1/1 77 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.71586 0.71590 0.32570 0.93 0.06 None None None None None None KANK4|0.062859636|59.12%

LDHAL6B

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 15 rs3825937
dbSNP Clinvar
59500116 1448.77 T C ReadPosRankSumTest 0/1 115 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.39896 0.39900 0.27234 0.06 0.62 None None None None None None MYO1E|0.320334371|26.13%,LDHAL6B|0.001955723|91.11%
View sample_hardfiltered 15 rs3809529
dbSNP Clinvar
59499228 546.77 C T ReadPosRankSumTest 0/1 62 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.49121 0.49120 0.35758 0.12 0.00 None None None None None None MYO1E|0.320334371|26.13%,LDHAL6B|0.001955723|91.11%
View sample_hardfiltered 15 rs3809530
dbSNP Clinvar
59499179 412.77 G A ReadPosRankSumTest 0/1 51 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.40276 0.40280 0.28082 0.15 0.01 None None None None None None MYO1E|0.320334371|26.13%,LDHAL6B|0.001955723|91.11%

MEFV

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 16 rs3743930
dbSNP Clinvar
3304626 704.77 C G ReadPosRankSumTest 0/1 45 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.12640 0.12640 0.01120 0.03 0.85 None None None None None None MEFV|0.009048238|81.61%

MYH9

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 22 rs559841300
dbSNP Clinvar
36716390 1259.77 G A ReadPosRankSumTest 0/1 95 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00040 0.00040 0.13 0.19 None None None None None None MYH9|0.668562251|9.42%
View sample_hardfiltered 22 rs2269529
dbSNP Clinvar
36684354 2234.77 T C ReadPosRankSumTest 0/1 100 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.29413 0.29410 0.15554 0.34 0.04 None None None None None None MYH9|0.668562251|9.42%

NPHS1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 19 rs3814995
dbSNP Clinvar
36342212 583.77 C T ReadPosRankSumTest 0/1 57 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.29193 0.29190 0.23320 0.04 0.97 None None None None None None NPHS1|0.136914546|44.89%

NUP205

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 7 rs7810767
dbSNP Clinvar
135304273 2854.77 G C PASS 1/1 91 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.98003 0.98000 0.01615 1.00 0.00 None None None None None None NUP205|0.611820323|11.41%

PLCE1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 10 rs2274224
dbSNP Clinvar
96039597 12366.77 G C PASS 1/1 401 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.48622 0.48620 0.47594 0.69 0.00 None None None None None None PLCE1|0.494563686|16.1%

TRPC6

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 11 rs36111323
dbSNP Clinvar
101359750 554.77 G A ReadPosRankSumTest 0/1 58 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.06430 0.06430 0.08820 0.28 1.00 None None None None None None TRPC6|0.710147935|8.23%
View sample_hardfiltered 11 rs3802829
dbSNP Clinvar
101454192 1633.77 G A ReadPosRankSumTest 0/1 135 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.06769 0.06769 0.06317 0.24 0.07 None None None None None None TRPC6|0.710147935|8.23%

TTC21B

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View sample_hardfiltered 2 rs7592429
dbSNP Clinvar
166788336 3102.77 T C PASS 1/1 99 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.94808 0.94810 0.05428 1.00 0.00 None None None None None None TTC21B|0.262775254|30.49%
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