SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 134
Number of Genes: 1

Export to: CSV

SLC9B1P1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_93.variant38 Y rs77147889
dbSNP Clinvar
13524594 585.78 G T PASS 1/1 25 NON_SYNONYMOUS_CODING MODERATE None 1.00 0.00 None None None None None None SLC9B1P1|0.002112226|90.7%
View combined sample_93.variant38 Y rs78220120
dbSNP Clinvar
13524664 94.73 C A PASS 0/1 32 NON_SYNONYMOUS_CODING MODERATE None 0.02 1.00 None None None None None None SLC9B1P1|0.002112226|90.7%
View combined sample_93.variant38 Y rs373109292
dbSNP Clinvar
13500658 123.07 T A PASS 0/1 18 STOP_GAINED HIGH None None None None None None None SLC9B1P1|0.002112226|90.7%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_93.variant38 Y . 13489309 121.51 G T PASS 0/1 11 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489312 130.39 C T PASS 0/1 13 None None None None None None None None None None
View combined sample_93.variant38 Y rs902970123
dbSNP Clinvar
13489328 124.37 G T,A,C PASS 0/2 17 None None None None None None None None None None
View combined sample_93.variant38 Y rs369318044
dbSNP Clinvar
13489329 262.38 C T,G PASS 0/1 18 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489330 482.73 AG AG... PASS 0/2 18 None None None None None None None None None None
View combined sample_93.variant38 Y rs957276219
dbSNP Clinvar
13489332 43.4 G A,C PASS 0/1 20 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489335 127.38 A G PASS 0/1 21 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489338 124.37 C G,A PASS 0/1 24 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489356 1441.41 TGC T,GGC PASS 2/1 35 None None None None None None None None None None
View combined sample_93.variant38 Y rs376324593
dbSNP Clinvar
13489358 331.52 C T PASS 0/1 35 None None None None None None None None None None
View combined sample_93.variant38 Y rs76489488
dbSNP Clinvar
13489359 229.27 G A,T PASS 0/1 31 None None None None None None None None None None
View combined sample_93.variant38 Y rs909937983
dbSNP Clinvar
13489361 193.3 G T,C,A PASS 0/1 36 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489363 85.7 C G PASS 0/1 38 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489366 166.66 CT C PASS 0/1 40 None None None None None None None None None None
View combined sample_93.variant38 Y rs79293394
dbSNP Clinvar
13489367 373.59 T C,G,A PASS 0/1 40 None None None None None None None None None None
View combined sample_93.variant38 Y rs1039639493
dbSNP Clinvar
13489369 43.25 C A PASS 0/1 37 None None None None None None None None None None
View combined sample_93.variant38 Y rs369789833
dbSNP Clinvar
13489371 69.65 C T,A PASS 0/2 36 None None None None None None None None None None
View combined sample_93.variant38 Y rs78280054
dbSNP Clinvar
13489569 685.42 G C,... PASS 1/1 5 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489570 174.35 G A,T PASS 0/2 5 None None None None None None None None None None
View combined sample_93.variant38 Y rs879222332
dbSNP Clinvar
13489578 73.66 C A,T PASS 0/1 5 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489596 64.93 A T PASS 0/1 5 None None None None None None None None None None
View combined sample_93.variant38 Y rs941663506
dbSNP Clinvar
13489602 64.63 C A,T PASS 0/1 6 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489606 723.49 C T,A PASS 0/1 6 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489615 441.51 ACCC AC... PASS 0/5 3 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489619 214.98 AC AA... PASS 0/1 4 None None None None None None None None None None
View combined sample_93.variant38 Y . 13500604 153.05 A T PASS 0/1 14 None None None None None None None None None SLC9B1P1|0.002112226|90.7%
View combined sample_93.variant38 Y rs763588005
dbSNP Clinvar
13500639 34.73 C T PASS 0/1 18 None None None None None None None None None SLC9B1P1|0.002112226|90.7%
View combined sample_93.variant38 Y rs75624256
dbSNP Clinvar
13572932 49.73 T C PASS 1/1 2 None None None None None None None None None None
View combined sample_93.variant38 Y rs77866025
dbSNP Clinvar
13572999 104.76 A G PASS 1/1 11 None None None None None None None None None None
View combined sample_93.variant38 Y rs73620059
dbSNP Clinvar
13573033 104.76 A C PASS 1/1 13 None None None None None None None None None None
View combined sample_93.variant38 Y rs78037666
dbSNP Clinvar
13573108 81.73 G C PASS 1/1 8 None None None None None None None None None None
View combined sample_93.variant38 Y rs78646699
dbSNP Clinvar
13573152 40.28 C A PASS 1/1 4 None None None None None None None None None None
View combined sample_93.variant38 Y rs879016544
dbSNP Clinvar
14107314 72.18 T C PASS 1/1 6 None None None None None None None None None None
View combined sample_93.variant38 Y rs79788321
dbSNP Clinvar
21154603 71.06 A C PASS 1/1 8 None None None None None None None None None None
View combined sample_93.variant38 Y rs74359393
dbSNP Clinvar
13311491 749.1 C T PASS 1/1 17 None None None None None None None None None None
View combined sample_93.variant38 Y rs77663237
dbSNP Clinvar
13524507 35.2 C T PASS 1/1 3 None None None None None None None None None SLC9B1P1|0.002112226|90.7%
View combined sample_93.variant38 Y rs75728214
dbSNP Clinvar
13311579 2065.77 A G PASS 1/1 39 None None None None None None None None None None
View combined sample_93.variant38 Y rs62601224
dbSNP Clinvar
13551963 782.48 G A PASS 1/1 74 None None None None None None None None None None
View combined sample_93.variant38 Y rs75046726
dbSNP Clinvar
13489300 253.66 A C,G,T PASS 0/2 8 None None None None None None None None None None
View combined sample_93.variant38 Y rs113863647
dbSNP Clinvar
13489303 241.61 G A,T PASS 0/2 10 None None None None None None None None None None
View combined sample_93.variant38 Y rs113759200
dbSNP Clinvar
13488033 70.65 C T PASS 0/1 6 None None None None None None None None None None
View combined sample_93.variant38 Y rs957154314
dbSNP Clinvar
13488043 73.66 A G,T PASS 0/1 4 None None None None None None None None None None
View combined sample_93.variant38 Y rs74525907
dbSNP Clinvar
13488044 79.68 C T PASS 0/1 4 None None None None None None None None None None
View combined sample_93.variant38 Y rs1039248734
dbSNP Clinvar
13488134 37.69 A G PASS 0/1 3 None None None None None None None None None None
View combined sample_93.variant38 Y rs1054653309
dbSNP Clinvar
13488148 103.6 A G PASS 0/1 3 None None None None None None None None None None
View combined sample_93.variant38 Y rs909140914
dbSNP Clinvar
13488169 109.63 G A PASS 1/1 2 None None None None None None None None None None
View combined sample_93.variant38 Y rs964586259
dbSNP Clinvar
13488170 109.63 C A PASS 1/1 2 None None None None None None None None None None
View combined sample_93.variant38 Y rs78695528
dbSNP Clinvar
13488174 163.66 C T PASS 1/1 2 None None None None None None None None None None
View combined sample_93.variant38 Y rs924676099
dbSNP Clinvar
13488186 238.6 G T PASS 1/1 4 None None None None None None None None None None
View combined sample_93.variant38 Y rs934675625
dbSNP Clinvar
13488187 112.64 C T,A PASS 1/1 4 None None None None None None None None None None
View combined sample_93.variant38 Y rs893391734
dbSNP Clinvar
13488203 49.57 G T PASS 1/1 4 None None None None None None None None None None
View combined sample_93.variant38 Y rs75512131
dbSNP Clinvar
13488215 325.59 C A,T,G PASS 3/3 4 None None None None None None None None None None
View combined sample_93.variant38 Y rs914566108
dbSNP Clinvar
13488264 382.48 C T PASS 0/1 5 None None None None None None None None None None
View combined sample_93.variant38 Y . 13488266 133.55 G T PASS 0/1 5 None None None None None None None None None None
View combined sample_93.variant38 Y rs78270074
dbSNP Clinvar
13488267 439.54 A G,T PASS 0/2 5 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489372 79.52 G A PASS 0/1 40 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489376 259.68 C T PASS 0/1 39 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489379 316.26 C A,T PASS 0/1 42 None None None None None None None None None None
View combined sample_93.variant38 Y rs999005805
dbSNP Clinvar
13489384 163.35 G A,T PASS 0/1 43 None None None None None None None None None None
View combined sample_93.variant38 Y rs113141092
dbSNP Clinvar
13489385 211.21 G A PASS 0/1 40 None None None None None None None None None None
View combined sample_93.variant38 Y rs111804532
dbSNP Clinvar
13489393 90.21 T G,A PASS 0/1 43 None None None None None None None None None None
View combined sample_93.variant38 Y rs1012630704
dbSNP Clinvar
13489395 235.15 C T,G PASS 0/1 37 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489398 278.76 G A PASS 0/1 45 None None None None None None None None None None
View combined sample_93.variant38 Y rs1022631489
dbSNP Clinvar
13489399 592.76 G T,A PASS 0/1 44 None None None None None None None None None None
View combined sample_93.variant38 Y rs971330794
dbSNP Clinvar
13489403 364.57 T A PASS 0/1 45 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489408 199.32 C A,T PASS 0/2 14 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489410 379.01 T C,A PASS 0/1 17 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489411 379.01 T A PASS 0/1 17 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489413 46.56 T C PASS 0/1 16 None None None None None None None None None None
View combined sample_93.variant38 Y rs75169378
dbSNP Clinvar
13489425 343.48 T C PASS 0/1 18 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489429 52.58 G C PASS 0/1 18 None None None None None None None None None None
View combined sample_93.variant38 Y . 13489431 55.59 G C PASS 0/1 16 None None None None None None None None None None
View combined sample_93.variant38 Y rs52812045
dbSNP Clinvar
21154426 520.91 G A PASS 0/1 56 None None None None None None None None None None
View combined sample_93.variant38 Y rs10465460
dbSNP Clinvar
21154466 815.72 T A PASS 1/1 48 None None None None None None None None None None
View combined sample_93.variant38 Y rs17855271
dbSNP Clinvar
21154569 57.94 A G PASS 1/1 7 None None None None None None None None None None
View combined sample_93.variant38 Y rs74890084
dbSNP Clinvar
13311501 968.81 G A PASS 1/1 20 None None None None None None None None None None
View combined sample_93.variant38 Y rs78550346
dbSNP Clinvar
13311584 2157.97 G A PASS 1/1 40 None None None None None None None None None None
View combined sample_93.variant38 Y rs78420790
dbSNP Clinvar
13311677 532.45 T C PASS 1/1 26 None None None None None None None None None None
View combined sample_93.variant38 Y rs1018319874
dbSNP Clinvar
13488013 31.67 T C PASS 0/1 9 None None None None None None None None None None
View combined sample_93.variant38 Y rs74462322
dbSNP Clinvar
13488017 101.42 C T PASS 0/1 9 None None None None None None None None None None
View combined sample_93.variant38 Y rs75223409
dbSNP Clinvar
13488022 34.68 A C,G PASS 0/1 9 None None None None None None None None None None
View combined sample_93.variant38 Y rs1029931414
dbSNP Clinvar
13488027 31.67 G C,A,T PASS 0/2 7 None None None None None None None None None None
View combined sample_93.variant38 Y rs76592029
dbSNP Clinvar
13488031 727.43 A G,C PASS 0/1 7 None None None None None None None None None None
View combined sample_93.variant38 Y rs757179695
dbSNP Clinvar
13488273 325.29 C A,T PASS 0/2 5 None None None None None None None None None None
View combined sample_93.variant38 Y . 13488276 121.51 C A PASS 0/1 6 None None None None None None None None None None
View combined sample_93.variant38 Y rs1005969006
dbSNP Clinvar
13488279 118.5 G A PASS 0/1 6 None None None None None None None None None None
View combined sample_93.variant38 Y . 13488289 97.43 AG... A PASS 0/1 7 None None None None None None None None None None
View combined sample_93.variant38 Y rs80326224
dbSNP Clinvar
13488299 169.68 G A,T PASS 0/2 6 None None None None None None None None None None
View combined sample_93.variant38 Y . 13488303 382.48 C T,A PASS 0/2 6 None None None None None None None None None None
View combined sample_93.variant38 Y rs79720360
dbSNP Clinvar
13488306 169.68 G C,T PASS 2/1 7 None None None None None None None None None None
View combined sample_93.variant38 Y . 13488311 154.47 C T,A PASS 0/1 7 None None None None None None None None None None
View combined sample_93.variant38 Y rs77243124
dbSNP Clinvar
13488313 124.68 G A PASS 0/1 7 None None None None None None None None None None
View combined sample_93.variant38 Y . 13488318 40.7 C A PASS 0/1 7 None None None None None None None None None None
View combined sample_93.variant38 Y . 13488324 223.55 C T,G,A PASS 3/3 7 None None None None None None None None None None
View combined sample_93.variant38 Y . 13488325 58.19 G A,T,C PASS 0/3 7 None None None None None None None None None None
View combined sample_93.variant38 Y rs111232028
dbSNP Clinvar
13488330 215.24 A G,T PASS 0/1 8 None None None None None None None None None None
View combined sample_93.variant38 Y . 13488333 37.69 C G PASS 0/1 8 None None None None None None None None None None