+ Filter Options

SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
 GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
 EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE 		MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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+ Genes

Genes:

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 14
Number of Genes: 0

Export to: CSV
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Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_70.variant31 9 rs150998016
dbSNP Clinvar 		66457216 540.16 A G PASS 0/1 292 MOTIF_DELETED LOW None None None None None None None None
View combined sample_70.variant31 9 rs140644333
dbSNP Clinvar 		66457231 991.18 G GAC PASS 0/1 350 MOTIF_DELETED LOW None None None None None None None None
View combined sample_70.variant31 9 . 66457211 1108.14 AC... AG... PASS 0/1 391 MOTIF_DELETED LOW None None None None None None None None
View combined sample_70.variant31 9 rs796638183
dbSNP Clinvar 		66457233 1110.5 G C PASS 0/1 376 MOTIF_DELETED LOW None None None None None None None None
View combined sample_70.variant31 11 rs148301540,rs373957049
dbSNP Clinvar 		73499066 2260.52 CG... C,... PASS 0/2 147 MOTIF_DELETED LOW None 0.17606 None None None None None None MRPL48|0.400108146|20.77%
View combined sample_70.variant31 12 rs141113929
dbSNP Clinvar 		133614394 149.92 CA... C PASS 1/1 29 MOTIF_DELETED LOW None None None None None None None ZNF84|0.009963588|80.86%
View combined sample_70.variant31 16 rs757592542
dbSNP Clinvar 		89653534 415.76 GC... G PASS 0/1 39 MOTIF_DELETED LOW None None None None None None None CPNE7|0.016959249|75.88%
View combined sample_70.variant31 16 rs746278860
dbSNP Clinvar 		89653545 816.45 AG... A PASS 0/1 50 MOTIF_DELETED LOW None None None None None None None CPNE7|0.016959249|75.88%
View combined sample_70.variant31 16 rs780672482
dbSNP Clinvar 		89653552 773.62 GG... G PASS 0/1 43 MOTIF_DELETED LOW None None None None None None None CPNE7|0.016959249|75.88%
View combined sample_70.variant31 17 . 3989642 1328.49 AA... A PASS 1/1 21 MOTIF_DELETED LOW None None None None None None None ZZEF1|0.170424205|40.25%
View combined sample_70.variant31 21 rs761137294
dbSNP Clinvar 		11098703 276.93 CA... C PASS 0/1 943 MOTIF_DELETED LOW None None None None None None None None
View combined sample_70.variant31 21 rs74415742
dbSNP Clinvar 		11098704 1499.13 A G PASS 0/1 877 MOTIF_DELETED LOW None None None None None None None None
View combined sample_70.variant31 21 rs73151874
dbSNP Clinvar 		11098723 1498.28 T C PASS 0/1 841 MOTIF_DELETED LOW None 0.07109 0.07109 None None None None None None None
View combined sample_70.variant31 18 . 3262072 3548.58 CG... CG... PASS 1/1 98 MOTIF_DELETED LOW None None None None None None None MYL12B|0.311838043|26.69%
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