SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes:

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 6
Number of Genes: 0

Export to: CSV
  • Page 1 of 1
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_68.variant29 1 rs146451020
dbSNP Clinvar
99418911 1198.19 TT... T,... PASS 6/3 23 None None None None None None None None None None
View combined sample_68.variant29 7 . 98548682 146.79 CT... CT... PASS 6/3 11 None None None None None None None None None TRRAP|0.422098574|19.5%
View combined sample_68.variant29 14 . 96999883 309.54 CT... CT... PASS 6/3 72 None None None None None None None None None PAPOLA|0.712974411|8.19%
View combined sample_68.variant29 17 rs71152640
dbSNP Clinvar
38247484 241.41 TA... TA... PASS 6/3 41 None None None None None None None None None THRA|0.911072553|3.21%
View combined sample_68.variant29 6 . 108509706 791.08 AA... A,... PASS 6/3 45 None None None None None None None None None NR2E1|0.721110093|7.95%
View combined sample_68.variant29 2 rs571309687
dbSNP Clinvar
169104054 2204.67 C CC... PASS 6/3 58 None None None 0.42931 0.42930 None None None None None None STK39|0.757526204|6.91%
  • Page 1 of 1