SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes:

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 7
Number of Genes: 0

Export to: CSV
  • Page 1 of 1
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_64.variant26 3 . 63988881 353.38 CTTT CT... PASS 2/6 61 None None None None None None None None None ATXN7|0.45901663|17.72%
View combined sample_64.variant26 20 rs878942155
dbSNP Clinvar
4706782 2189.46 AT AT... PASS 2/6 47 None None None None None None None None None PRND|0.009371685|81.4%
View combined sample_64.variant26 1 . 204081655 1397.54 A AC... PASS 2/6 27 None None None None None None None None None SOX13|0.110596707|49.09%
View combined sample_64.variant26 6 rs771632640
dbSNP Clinvar
32489588 829.75 TC... TC... PASS 2/6 18 None None None None None None None None None HLA-DRB5|0.020830666|73.74%
View combined sample_64.variant26 16 . 16228482 111.27 CT... C,... PASS 2/6 14 None None None None None None None None None ABCC1|0.091540799|52.94%
View combined sample_64.variant26 16 . 20708878 322.51 TA... TA... PASS 2/6 16 None None None None None None None None None ACSM3|0.167284946|40.62%,ACSM1|0.006779542|83.72%
View combined sample_64.variant26 18 . 67515255 973.86 TC... TC... PASS 2/6 24 None None None None None None None None None DOK6|0.414097507|19.92%,CD226|0.|85.1%
  • Page 1 of 1