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+ Genes 1

Genes:
MICALCL,

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 126
Number of Genes: 1

Export to: CSV

MICALCL
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_62.variant24 11 rs761605598
dbSNP Clinvar 		12316344 186.11 GC... GC... PASS 0/5 22 CODON_INSERTION MODERATE None None None None None None None MICALCL|0.003201698|88.32%
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_62.variant24 1 rs748034364
dbSNP Clinvar 		114449826 490.04 GT... GT... PASS 0/5 23 None None None 0.06175 None None None None None None DCLRE1B|0.066067298|58.35%
View combined sample_62.variant24 2 . 7471480 47.12 TCACA TC... PASS 0/5 22 None None None None None None None None None None
View combined sample_62.variant24 2 rs375905591,rs397724817
dbSNP Clinvar 		9661969 3020.68 T TC... PASS 0/5 66 None None None None None None None None None ADAM17|0.398835803|20.86%
View combined sample_62.variant24 2 . 45172449 165.18 TA... TA... PASS 0/5 9 None None None None None None None None None SIX3|0.588177172|12.2%
View combined sample_62.variant24 2 . 191552121 162.93 CA... CA... PASS 0/5 42 None None None None None None None None None NAB1|0.259710649|30.76%
View combined sample_62.variant24 2 . 197000501 139.34 CA CA... PASS 0/5 35 None None None None None None None None None STK17B|0.190903367|37.72%
View combined sample_62.variant24 2 . 217123230 73.82 GG... GG... PASS 0/5 39 None None None None None None None None None MARCH4|0.393664746|21.15%
View combined sample_62.variant24 3 . 196559607 113.35 CT... CT... PASS 0/5 6 None None None None None None None None None None
View combined sample_62.variant24 3 . 197613675 84.7 CAAAA CA... PASS 0/5 11 None None None None None None None None None LRCH3|0.208574321|35.75%
View combined sample_62.variant24 4 . 40812594 358.77 CAAA CA... PASS 0/5 74 None None None None None None None None None APBB2|0.401070014|20.7%
View combined sample_62.variant24 4 rs768174909
dbSNP Clinvar 		122851985 95.53 TAAA TA... PASS 0/5 49 None None None None None None None None None TRPC3|0.716116848|8.1%
View combined sample_62.variant24 5 rs879243889
dbSNP Clinvar 		125929000 374.21 AA... AA... PASS 0/5 14 None None None None None None None None None ALDH7A1|0.08379131|54.47%
View combined sample_62.variant24 5 rs765661151,rs3075597
dbSNP Clinvar 		141034749 164.65 TACAC TA... PASS 0/5 9 None None None None None None None None None ARAP3|0.158448394|41.8%
View combined sample_62.variant24 5 . 179004160 218.66 CT... CT... PASS 0/5 19 None None None None None None None None None RUFY1|0.095927869|51.95%
View combined sample_62.variant24 6 rs759220446
dbSNP Clinvar 		80409180 94.25 CTTT CT... PASS 0/5 31 None None None None None None None None None SH3BGRL2|0.347789913|24.29%
View combined sample_62.variant24 6 . 125409160 82.58 CT... CT... PASS 0/5 11 None None None None None None None None None RNF217|0.377303916|22.24%
View combined sample_62.variant24 7 rs768464611
dbSNP Clinvar 		3180880 298.19 CT... CT... PASS 0/5 21 None None None None None None None None None None
View combined sample_62.variant24 7 rs766308418
dbSNP Clinvar 		155465438 930.75 CAAAA C,... PASS 0/5 33 None None None None None None None None None RBM33|0.151811738|42.71%
View combined sample_62.variant24 9 . 112629444 381.53 CT... CT... PASS 0/5 22 None None None None None None None None None PALM2|0.566426234|13.14%,PALM2-AKAP2|0.163410266|41.09%,AKAP2|0.121220388|47.25%
View combined sample_62.variant24 9 . 127282180 232.11 CA... C,... PASS 0/5 23 None None None None None None None None None NR6A1|0.832541273|5.06%
View combined sample_62.variant24 10 . 31816340 649.21 AA... AA... PASS 0/5 74 None None None None None None None None None ZEB1|0.848008697|4.69%
View combined sample_62.variant24 11 rs151193662
dbSNP Clinvar 		8797705 190.79 G GC... PASS 0/5 18 None None None None None None None None None ST5|0.586705088|12.27%
View combined sample_62.variant24 12 . 1021888 45.11 CA... C,... PASS 0/5 6 None None None None None None None None None RAD52|0.088397129|53.56%
View combined sample_62.variant24 11 . 76735117 42.17 CA... CA... PASS 0/5 30 None None None None None None None None None ACER3|0.282744715|28.9%
View combined sample_62.variant24 12 rs574938327
dbSNP Clinvar 		50898784 896.05 T TG... PASS 0/5 43 None None None None None None None None None DIP2B|0.298176255|27.8%
View combined sample_62.variant24 13 . 79894084 41.76 CT... CT... PASS 0/5 27 SPLICE_SITE_REGION LOW None None None None None None None RBM26|0.590270463|12.12%
View combined sample_62.variant24 15 rs878911812
dbSNP Clinvar 		35044155 218.0 GG... GA... PASS 0/5 11 None None None None None None None None None GJD2|0.601939407|11.72%
View combined sample_62.variant24 15 . 43698238 496.21 CAAAA CA... PASS 0/5 41 None None None None None None None None None TUBGCP4|0.546542388|13.88%
View combined sample_62.variant24 15 rs878864381
dbSNP Clinvar 		63616886 43.96 ATT AT... PASS 0/5 25 None None None None None None None None None CA12|0.074205068|56.48%
View combined sample_62.variant24 15 . 65620633 31.89 CTT CT... PASS 0/5 19 None None None None None None None None None IGDCC3|0.149303312|43.11%
View combined sample_62.variant24 16 . 4737579 241.04 TAC TA... PASS 0/5 9 None None None None None None None None None MGRN1|0.132392343|45.56%
View combined sample_62.variant24 16 rs200220113
dbSNP Clinvar 		24676090 301.03 TC... TC... PASS 0/5 17 None None None None None None None None None None
View combined sample_62.variant24 17 rs150367922,rs71300085
dbSNP Clinvar 		37101101 151.61 A AT... PASS 0/5 6 None None None None None None None None None FBXO47|0.203159321|36.35%
View combined sample_62.variant24 17 . 37400091 214.94 CAAA CA... PASS 0/5 20 None None None None None None None None None None
View combined sample_62.variant24 17 rs748065402
dbSNP Clinvar 		38375620 1525.74 TGGC TG... PASS 0/5 37 None None None None None None None None None WIPF2|0.474170171|17%
View combined sample_62.variant24 18 . 39609498 195.09 AT... A,... PASS 0/5 14 None None None None None None None None None PIK3C3|0.681971085|9.02%
View combined sample_62.variant24 19 rs771341171
dbSNP Clinvar 		13218799 127.54 CT... CT... PASS 0/5 20 None None None None None None None None None TRMT1|0.046642796|63.69%
View combined sample_62.variant24 19 . 14492077 355.87 CG... CG... PASS 0/5 37 None None None None None None None None None ADGRE5|0.001053928|95.16%
View combined sample_62.variant24 19 rs372915938
dbSNP Clinvar 		39797370 91.66 AA... AA... PASS 0/5 18 None None None None None None None None None LRFN1|0.061207448|59.53%
View combined sample_62.variant24 19 . 44889162 730.39 CA... C,... PASS 0/5 35 None None None None None None None None None ZNF285|0.001247601|94.18%
View combined sample_62.variant24 21 . 44438157 352.5 CA... CA... PASS 0/5 21 None None None None None None None None None PKNOX1|0.097034249|51.72%
View combined sample_62.variant24 21 rs796798002
dbSNP Clinvar 		45094467 137.54 CTT C,... PASS 0/5 21 None None None None None None None None None RRP1B|0.00474795|86.16%
View combined sample_62.variant24 22 . 18358448 62.19 TAAA T,... PASS 0/5 11 None None None None None None None None None MICAL3|0.205641571|36.04%
View combined sample_62.variant24 X . 1317599 218.7 TA... TA... PASS 0/5 36 None None None None None None None None None CRLF2|0.001160822|94.64%
View combined sample_62.variant24 1 rs371457544
dbSNP Clinvar 		111893788 117.88 GT... GT... PASS 0/5 29 None None None 0.37380 0.37380 None None None None None None PIFO|0.015568192|76.74%
View combined sample_62.variant24 22 . 50913394 518.22 CG... CG... PASS 0/5 52 None None None None None None None None None SBF1|0.055734272|61.01%
View combined sample_62.variant24 1 . 167862933 34.53 CA... CA... PASS 0/5 8 None None None None None None None None None ADCY10|0.02878338|70.03%
View combined sample_62.variant24 2 . 219941279 63.57 CT... CT... PASS 0/5 14 None None None None None None None None None NHEJ1|0.125381052|46.57%,SLC23A3|0.053610275|61.58%
View combined sample_62.variant24 3 rs537893659
dbSNP Clinvar 		29628718 215.21 GTTT GT... PASS 0/5 30 None None None None None None None None None RBMS3|0.934703314|2.66%
View combined sample_62.variant24 3 rs770031001
dbSNP Clinvar 		119348345 1092.9 AT AT... PASS 0/5 122 None None None None None None None None None PLA1A|0.038413908|66.33%
View combined sample_62.variant24 3 rs756050149
dbSNP Clinvar 		148897498 318.52 TACAC T,... PASS 0/5 25 None None None None None None None None None CP|0.122810298|46.99%
View combined sample_62.variant24 4 . 30976765 308.77 TT... TT... PASS 0/5 20 None None None None None None None None None PCDH7|0.844117038|4.78%
View combined sample_62.variant24 4 rs746889575
dbSNP Clinvar 		76442226 177.0 CTT CT... PASS 0/5 9 None None None None None None None None None THAP6|0.084556606|54.3%
View combined sample_62.variant24 5 rs563628023
dbSNP Clinvar 		112361289 368.12 CA CA... PASS 0/5 44 None None None 0.14796 0.14800 None None None None None None MCC|0.469013944|17.21%
View combined sample_62.variant24 7 rs745754898
dbSNP Clinvar 		102961277 39.11 CT... CT... PASS 0/5 12 None None None None None None None None None PMPCB|0.329266362|25.53%,DNAJC2|0.717966079|8.02%
View combined sample_62.variant24 7 . 132719268 213.88 CT... CT... PASS 0/5 15 None None None None None None None None None CHCHD3|0.780649095|6.3%
View combined sample_62.variant24 8 . 74213277 300.09 CT... CT... PASS 0/5 14 None None None None None None None None None RDH10|0.502683776|15.72%
View combined sample_62.variant24 9 rs3045544
dbSNP Clinvar 		84267021 510.01 TAC TA... PASS 0/5 24 None None None None None None None None None TLE1|0.907652554|3.29%
View combined sample_62.variant24 10 . 47088385 242.86 T TG... PASS 0/5 25 None None None None None None None None None None
View combined sample_62.variant24 10 rs143655538
dbSNP Clinvar 		126674850 651.96 GC... GC... PASS 0/5 164 None None None 0.78734 0.78730 None None None None None None ZRANB1|0.297372446|27.85%
View combined sample_62.variant24 11 . 25102575 39.07 ATT AT... PASS 0/5 19 None None None None None None None None None LUZP2|0.078859085|55.46%
View combined sample_62.variant24 11 . 26655627 311.68 CA CA... PASS 0/5 14 None None None None None None None None None ANO3|0.315688772|26.37%
View combined sample_62.variant24 11 . 48186110 277.64 AT... AT... PASS 0/5 20 None None None None None None None None None PTPRJ|0.001744449|91.7%
View combined sample_62.variant24 11 . 125448376 112.27 CTTTT CT... PASS 0/5 16 None None None None None None None None None EI24|0.31494271|26.44%
View combined sample_62.variant24 12 rs59863032
dbSNP Clinvar 		48414009 249.41 CT CT... PASS 0/5 39 None None None None None None None None None None
View combined sample_62.variant24 13 . 27998074 99.33 CT... CT... PASS 0/5 9 None None None None None None None None None None
View combined sample_62.variant24 14 . 23440324 192.25 CA... CA... PASS 0/5 14 None None None None None None None None None None
View combined sample_62.variant24 16 rs758915094,rs869169091
dbSNP Clinvar 		8986463 343.28 TA... TA... PASS 0/5 19 None None None None None None None None None USP7|0.774291764|6.46%
View combined sample_62.variant24 16 . 9854231 51.22 AT... AT... PASS 0/5 47 None None None None None None None None None GRIN2A|0.560581536|13.34%
View combined sample_62.variant24 17 rs756614244
dbSNP Clinvar 		30519351 734.26 CTTTT CT... PASS 0/5 49 None None None None None None None None None RHOT1|0.726362207|7.79%
View combined sample_62.variant24 18 . 21124907 630.97 AC AC... PASS 0/5 72 None None None None None None None None None NPC1|0.141724211|44.18%
View combined sample_62.variant24 22 rs71679890,rs529542864
dbSNP Clinvar 		31971071 413.64 CG... CG... PASS 0/5 7 None None None None None None None None None SFI1|0.009882452|80.95%
View combined sample_62.variant24 X rs58394778
dbSNP Clinvar 		24536954 165.25 GC... GC... PASS 0/5 7 None None None None None None None None None PDK3|0.302411039|27.46%
View combined sample_62.variant24 1 rs56952565
dbSNP Clinvar 		38462387 89.74 AA... AA... PASS 0/5 5 None None None None None None None None None None
View combined sample_62.variant24 1 . 48762797 343.1 GG... GG... PASS 0/5 120 None None None None None None None None None SPATA6|0.253984716|31.22%
View combined sample_62.variant24 1 . 156949153 121.2 CTTTT CT... PASS 0/5 29 None None None None None None None None None ARHGEF11|0.107056542|49.78%
View combined sample_62.variant24 1 . 173905652 190.89 CAAAA CA... PASS 0/5 30 None None None None None None None None None RC3H1|0.457179013|17.8%
View combined sample_62.variant24 1 . 182569291 42.85 AT... AT... PASS 0/5 16 None None None None None None None None None RGS16|0.06020516|59.8%
View combined sample_62.variant24 1 . 247287297 70.4 A AT... PASS 0/5 28 None None None None None None None None None ZNF124|0.001541214|92.57%
View combined sample_62.variant24 2 rs200229465,rs767432231,rs557057155
dbSNP Clinvar 		32534750 127.49 CT... CT... PASS 0/5 16 None None None 0.65535 0.65540 None None None None None None YIPF4|0.210582677|35.5%
View combined sample_62.variant24 2 . 128941511 32.57 TG... TG... PASS 0/5 7 None None None None None None None None None UGGT1|0.159062304|41.71%
View combined sample_62.variant24 2 rs142260263
dbSNP Clinvar 		135603079 118.86 GT... GT... PASS 0/5 7 None None None None None None None None None ACMSD|0.33638393|25.06%
View combined sample_62.variant24 2 . 182541839 68.79 AT... AT... PASS 0/5 13 None None None None None None None None None CERKL|0.162317398|41.25%,NEUROD1|0.993003191|0.95%
View combined sample_62.variant24 3 rs869277612,rs533596688
dbSNP Clinvar 		54952359 621.11 CTTTT CT... PASS 0/5 78 None None None None None None None None None CACNA2D3|0.956528589|2.05%,LRTM1|0.033026592|68.14%
View combined sample_62.variant24 3 . 154858199 111.4 CT... CT... PASS 0/5 12 None None None None None None None None None MME|0.543919168|14.04%
View combined sample_62.variant24 4 . 56298641 468.69 CTT CT... PASS 0/5 36 None None None None None None None None None TMEM165|0.104313553|50.37%,CLOCK|0.729300056|7.68%
View combined sample_62.variant24 4 . 84011680 44.26 CAAAA CA... PASS 0/5 5 None None None None None None None None None PLAC8|0.020315127|74.02%
View combined sample_62.variant24 4 . 109810573 278.04 AT... AT... PASS 0/5 19 None None None None None None None None None COL25A1|0.612068275|11.4%
View combined sample_62.variant24 4 . 152025591 381.63 GT... GT... PASS 0/5 14 None None None None None None None None None RPS3A|0.389316542|21.45%,SH3D19|0.131705972|45.65%
View combined sample_62.variant24 4 . 186283991 61.04 CTT CT... PASS 0/5 11 None None None None None None None None None SNX25|0.217218036|34.69%
View combined sample_62.variant24 5 rs748690607
dbSNP Clinvar 		4095679 92.72 TTTTC TT... PASS 0/5 17 None None None None None None None None None None
View combined sample_62.variant24 5 rs149827871
dbSNP Clinvar 		81550718 4106.45 AGT AG... PASS 0/5 136 None None None None None None None None None ATG10|0.133054505|45.45%
View combined sample_62.variant24 6 . 79650265 533.58 GT... GT... PASS 0/5 74 None None None None None None None None None IRAK1BP1|0.071304062|57.14%,PHIP|0.581160251|12.52%
View combined sample_62.variant24 7 . 42187734 163.24 GC... GC... PASS 0/5 13 None None None None None None None None None GLI3|0.399227433|20.82%
View combined sample_62.variant24 7 rs148551048
dbSNP Clinvar 		43400656 82.44 CG... CG... PASS 0/5 7 None None None None None None None None None HECW1|0.293834197|28.13%
View combined sample_62.variant24 8 rs60062081
dbSNP Clinvar 		22477930 237.73 GTTT GT... PASS 0/5 25 SPLICE_SITE_REGION LOW None None None None None None None CCAR2|0.363674682|23.18%
View combined sample_62.variant24 8 . 101716282 46.23 CAAAA CA... PASS 0/5 9 None None None None None None None None None PABPC1|0.793315578|6.01%
View combined sample_62.variant24 9 rs368204817,rs557548970
dbSNP Clinvar 		132590062 76.77 CTTTT CT... PASS 0/5 56 None None None None None None None None None C9orf78|0.212670769|35.28%
View combined sample_62.variant24 9 rs774757899
dbSNP Clinvar 		139302015 942.11 TAAAA TA... PASS 0/5 24 None None None None None None None None None SDCCAG3|0.028543555|70.16%