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 CHR:

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EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

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SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
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FREQUENCIES

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EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

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EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

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CADD

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EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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+ Genes

Genes:

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 17
Number of Genes: 0

Export to: CSV
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Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_61.variant23 2 rs2305161
dbSNP Clinvar 		177134172 2746.63 C T PASS 0/1 161 MOTIF[MA0062.1:Gabp] LOW None 0.24820 0.24820 None None None None None None MTX2|0.824376132|5.2%
View combined sample_61.variant23 7 rs77036114
dbSNP Clinvar 		56174351 544.44 C G PASS 0/1 35 MOTIF[MA0062.1:Gabp] MODIFIER None 0.00220 0.13680 None None None None None None None
View combined sample_61.variant23 7 rs146847249
dbSNP Clinvar 		56174353 535.38 CG C PASS 0/1 35 MOTIF[MA0062.1:Gabp] LOW None 0.13838 0.13840 None None None None None None None
View combined sample_61.variant23 10 rs7922050
dbSNP Clinvar 		16479007 372.33 C G PASS 0/1 39 MOTIF[MA0062.1:Gabp] MODIFIER None 0.66374 0.66370 None None None None None None PTER|0.605865305|11.6%
View combined sample_61.variant23 19 rs55794952
dbSNP Clinvar 		50879675 193.34 G T PASS 0/1 21 MOTIF[MA0062.1:Gabp] LOW None 0.00539 0.00539 None None None None None None NR1H2|0.484472054|16.53%
View combined sample_61.variant23 1 rs112918702,rs533388228
dbSNP Clinvar 		85725353 621.21 GC... G PASS 0/1 84 MOTIF[MA0062.1:Gabp] LOW None 0.40455 0.40460 0.36497 None None None None None None C1orf52|0.098259766|51.49%
View combined sample_61.variant23 7 . 5938326 227.53 C T PASS 1/1 11 MOTIF[MA0062.1:Gabp] LOW None None None None None None None None
View combined sample_61.variant23 8 rs56316188
dbSNP Clinvar 		59323811 1343.02 A G PASS 0/1 96 MOTIF[MA0062.1:Gabp] LOW None 0.24581 0.24580 None None None None None None None
View combined sample_61.variant23 17 rs2955626
dbSNP Clinvar 		618100 810.3 C G PASS 0/1 120 MOTIF[MA0062.1:Gabp] MODIFIER None 0.66753 0.66750 None None None None None None VPS53|0.411696194|20.07%
View combined sample_61.variant23 19 rs2283616
dbSNP Clinvar 		18682495 1785.87 A C PASS 0/1 28 MOTIF[MA0062.1:Gabp] MODIFIER None 0.70108 0.70110 None None None None None None None
View combined sample_61.variant23 20 rs7266947
dbSNP Clinvar 		26188912 31076.5 A C PASS 0/1 1923 MOTIF[MA0062.1:Gabp] LOW None None None None None None None None
View combined sample_61.variant23 X rs199508989
dbSNP Clinvar 		14048063 926.58 TC T PASS 1/1 19 MOTIF[MA0062.1:Gabp] LOW None 0.00821 0.00821 None None None None None None None
View combined sample_61.variant23 3 rs1048948525
dbSNP Clinvar 		121264945 155.84 C T PASS 0/1 18 MOTIF[MA0062.1:Gabp] MODIFIER None None None None None None None None
View combined sample_61.variant23 6 rs3736175
dbSNP Clinvar 		151773164 602.34 G A PASS 0/1 45 MOTIF[MA0062.1:Gabp] LOW None 0.10104 0.10100 None None None None None None RMND1|0.206108401|36.01%
View combined sample_61.variant23 11 rs11217125
dbSNP Clinvar 		118889185 1926.15 T C PASS 0/1 115 MOTIF[MA0062.1:Gabp] MODIFIER None 0.27077 0.27080 None None None None None None RPS25|0.414981471|19.87%,TRAPPC4|0.703226976|8.41%
View combined sample_61.variant23 13 rs144160325
dbSNP Clinvar 		111364877 231.69 A AG... PASS 3/2 24 MOTIF[MA0062.1:Gabp] LOW None None None None None None None CARS2|0.018441874|74.99%
View combined sample_61.variant23 20 rs761246236
dbSNP Clinvar 		1373845 320.41 CC... C PASS 0/1 33 MOTIF[MA0062.1:Gabp] LOW None None None None None None None None
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