SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes:

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 10
Number of Genes: 0

Export to: CSV
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Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_56.variant19 6 rs2754775
dbSNP Clinvar
24775181 417.53 G T PASS 0/1 60 MOTIF[MA0059.1:Cmyc] LOW None 0.18031 0.18030 None None None None None None GMNN|0.456671649|17.84%
View combined sample_56.variant19 9 rs10819453
dbSNP Clinvar
131679897 2761.95 A G PASS 1/1 72 MOTIF[MA0059.1:Cmyc] MODIFIER None 0.99740 0.99740 None None None None None None LRRC8A|0.333347421|25.21%
View combined sample_56.variant19 17 rs690979
dbSNP Clinvar
41116723 1015.47 G A PASS 1/1 30 MOTIF[MA0059.1:Cmyc] LOW None 0.92951 0.92950 None None None None None None PTGES3L-AARSD1|0.118905505|47.59%
View combined sample_56.variant19 19 rs36615
dbSNP Clinvar
54705207 2503.58 G A PASS 0/1 217 MOTIF[MA0059.1:Cmyc] LOW None 0.19129 0.19130 None None None None None None RPS9|0.191676848|37.63%
View combined sample_56.variant19 20 rs5000466
dbSNP Clinvar
26189108 17974.5 A C PASS 0/1 437 MOTIF[MA0059.1:Cmyc] MODIFIER None None None None None None None None
View combined sample_56.variant19 9 rs9411215
dbSNP Clinvar
139569066 192.83 A G PASS 1/1 37 MOTIF[MA0059.1:Cmyc] MODIFIER None 0.71925 0.71920 None None None None None None AGPAT2|0.018792809|74.8%
View combined sample_56.variant19 11 rs56012779
dbSNP Clinvar
537365 91.46 T C PASS 0/1 14 MOTIF[MA0059.1:Cmyc] MODIFIER None 0.24082 0.24080 None None None None None None None
View combined sample_56.variant19 12 rs60123248
dbSNP Clinvar
133657066 1229.74 T C PASS 0/1 103 MOTIF[MA0059.1:Cmyc] MODIFIER None None None None None None None ZNF140|0.01034015|80.61%
View combined sample_56.variant19 14 rs12891473
dbSNP Clinvar
35452257 1407.48 T C PASS 0/1 104 MOTIF[MA0059.1:Cmyc] MODIFIER None 0.48962 0.48960 None None None None None None SRP54|0.799515244|5.86%
View combined sample_56.variant19 16 rs11640414
dbSNP Clinvar
30786715 4702.21 T C PASS 1/1 180 MOTIF[MA0059.1:Cmyc] MODIFIER None 0.97484 0.97480 None None None None None None RNF40|0.268448821|29.98%
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