SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes:

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 13
Number of Genes: 0

Export to: CSV
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Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_55.variant18 1 . 156845492 809.19 AG... AG... PASS 5/1 76 None None None None None None None None None NTRK1|0.341411283|24.74%
View combined sample_55.variant18 8 rs755990611
dbSNP Clinvar
116421489 1263.02 GAA GA... PASS 5/1 83 None None None None None None None None None TRPS1|0.98551969|1.26%
View combined sample_55.variant18 13 . 36050433 716.65 CC... CC... PASS 5/1 32 None None None None None None None None None NBEA|0.760153297|6.83%,MAB21L1|0.642231388|10.38%
View combined sample_55.variant18 2 rs70946932
dbSNP Clinvar
36775410 230.62 CTT CT... PASS 5/1 59 None None None None None None None None None CRIM1|0.439596131|18.68%
View combined sample_55.variant18 3 rs878937818
dbSNP Clinvar
69025792 3676.65 CGT CG... PASS 5/1 121 None None None None None None None None None EOGT|0.11984929|47.48%
View combined sample_55.variant18 5 . 137492514 118.69 TA... TA... PASS 5/1 15 None None None None None None None None None BRD8|0.564301197|13.19%
View combined sample_55.variant18 11 . 6549634 841.04 GG... GG... PASS 5/1 52 None None None None None None None None None DNHD1|0.019835865|74.26%
View combined sample_55.variant18 13 rs878917524
dbSNP Clinvar
53010353 141.78 AAC AA... PASS 5/1 15 None None None None None None None None None VPS36|0.441505157|18.59%
View combined sample_55.variant18 17 . 40359505 488.51 GC... GC... PASS 5/1 66 None None None None None None None None None STAT5B|0.791650824|6.07%
View combined sample_55.variant18 19 rs71176433
dbSNP Clinvar
15658803 86.99 AG... AG... PASS 5/1 44 None None None None None None None None None CYP4F22|0.026818585|70.99%
View combined sample_55.variant18 21 rs145550964,rs55884088
dbSNP Clinvar
34697197 472.32 G GG... PASS 5/1 65 None None None 0.01038 0.01038 None None None None None None IFNAR1|0.002595288|89.49%
View combined sample_55.variant18 X rs878979493
dbSNP Clinvar
106184601 497.96 TG... TG... PASS 5/1 27 None None None None None None None None None MORC4|0.183658843|38.58%
View combined sample_55.variant18 2 . 37073027 97.04 AA... AA... PASS 5/1 10 None None None None None None None None None STRN|0.401385344|20.67%
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