SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes:

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 18
Number of Genes: 0

Export to: CSV
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Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_51.variant15 1 rs45491397
dbSNP Clinvar
9327344 701.83 G T PASS 0/1 61 MOTIF[MA0147.1:Cmyc] LOW None 0.10383 0.10380 None None None None None None H6PD|0.129103047|46.01%
View combined sample_51.variant15 1 rs17369088
dbSNP Clinvar
179334801 284.46 C A PASS 0/1 8 MOTIF[MA0147.1:Cmyc] LOW None 0.45328 0.45330 None None None None None None None
View combined sample_51.variant15 3 rs11717719
dbSNP Clinvar
126247795 69.17 C T PASS 0/1 17 MOTIF[MA0147.1:Cmyc] LOW None 0.45068 0.45070 None None None None None None CHST13|0.027597209|70.61%,C3orf22|0.001090009|94.98%
View combined sample_51.variant15 4 rs13138404
dbSNP Clinvar
88312504 118.6 C T PASS 0/1 23 MOTIF[MA0147.1:Cmyc] LOW None 0.20447 0.20450 None None None None None None HSD17B11|0.055099771|61.16%
View combined sample_51.variant15 9 rs28705707
dbSNP Clinvar
139940653 1130.64 C A PASS 0/1 34 MOTIF[MA0147.1:Cmyc] MODIFIER None 0.21805 0.21810 None None None None None None NPDC1|0.003521242|87.74%
View combined sample_51.variant15 22 rs8139784
dbSNP Clinvar
41682014 1756.95 G T PASS 0/1 194 MOTIF[MA0147.1:Cmyc] LOW None 0.12520 0.12520 None None None None None None RANGAP1|0.390150597|21.41%
View combined sample_51.variant15 4 rs2286773
dbSNP Clinvar
17616214 2546.89 C A PASS 1/1 78 MOTIF[MA0147.1:Cmyc] LOW None 0.00240 0.63500 None None None None None None None
View combined sample_51.variant15 8 rs12679542
dbSNP Clinvar
55048118 293.13 G T PASS 0/1 51 MOTIF[MA0147.1:Cmyc] LOW None 0.46586 0.46590 None None None None None None MRPL15|0.323579491|25.92%
View combined sample_51.variant15 11 rs10766196
dbSNP Clinvar
14913131 2246.19 A G PASS 0/1 101 MOTIF[MA0147.1:Cmyc] MODIFIER None 0.34944 0.34940 None None None None None None CYP2R1|0.406542646|20.4%
View combined sample_51.variant15 12 rs58343288
dbSNP Clinvar
3862083 248.07 G T PASS 0/1 33 MOTIF[MA0147.1:Cmyc] MODIFIER None 0.22065 0.22060 None None None None None None CRACR2A|0.025184892|71.72%
View combined sample_51.variant15 14 rs3215680,rs397830487
dbSNP Clinvar
93799514 1395.49 TG T PASS 1/1 64 MOTIF[MA0147.1:Cmyc] LOW None None None None None None None None
View combined sample_51.variant15 17 rs3813911
dbSNP Clinvar
36003275 196.77 T A PASS 1/1 26 MOTIF[MA0147.1:Cmyc] LOW None 0.75120 0.75120 None None None None None None DDX52|0.446354586|18.34%
View combined sample_51.variant15 5 rs548424566
dbSNP Clinvar
14871920 276.97 G GC... PASS 1/1 8 MOTIF[MA0147.1:Cmyc] LOW None 0.00100 0.49560 None None None None None None None
View combined sample_51.variant15 7 rs4727266
dbSNP Clinvar
91570129 978.58 C T PASS 1/1 55 MOTIF[MA0147.1:Cmyc] LOW None 0.62859 0.62860 None None None None None None None
View combined sample_51.variant15 10 rs35217943
dbSNP Clinvar
7451374 711.64 TC T PASS 1/1 37 MOTIF[MA0147.1:Cmyc] LOW None 0.73562 0.73560 None None None None None None SFMBT2|0.078860271|55.46%
View combined sample_51.variant15 16 rs1563072
dbSNP Clinvar
81129416 194.76 G A PASS 1/1 3 MOTIF[MA0147.1:Cmyc] LOW None 0.91414 0.91410 None None None None None None GCSH|0.200287354|36.73%
View combined sample_51.variant15 19 rs2277739
dbSNP Clinvar
2977362 198.15 G A PASS 0/1 30 MOTIF[MA0147.1:Cmyc] MODIFIER None 0.31170 0.31170 None None None None None None None
View combined sample_51.variant15 19 rs2231569
dbSNP Clinvar
36605875 668.24 G T PASS 0/1 67 MOTIF[MA0147.1:Cmyc] LOW None 0.02516 0.02516 None None None None None None POLR2I|0.627910592|10.86%,TBCB|0.146039259|43.57%
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