+ Filter Options

SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
 GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
 EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE 		MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
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+ Genes

Genes:

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 12
Number of Genes: 0

Export to: CSV
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Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_47.variant11 5 rs149827871
dbSNP Clinvar 		81550718 4106.45 AGT AG... PASS 3/5 87 None None None None None None None None None ATG10|0.133054505|45.45%
View combined sample_47.variant11 8 . 42878530 1813.86 CT... CT... PASS 3/5 86 None None None None None None None None None HOOK3|0.362513826|23.26%
View combined sample_47.variant11 19 rs141701236
dbSNP Clinvar 		52227137 522.41 TA... TA... PASS 3/5 31 None None None None None None None None None HAS1|0.18273667|38.7%
View combined sample_47.variant11 22 rs201209827,rs781822200
dbSNP Clinvar 		18032459 803.22 GT... GT... PASS 3/5 30 None None None 0.94948 0.94950 None None None None None None CECR2|0.038569705|66.27%
View combined sample_47.variant11 10 rs757274948
dbSNP Clinvar 		94111658 902.22 CG... CG... PASS 3/5 34 None None None None None None None None None MARCH5|0.753061842|7.01%
View combined sample_47.variant11 1 . 183100563 649.43 GGT GT... PASS 3/5 16 None None None None None None None None None LAMC1|0.212040641|35.36%
View combined sample_47.variant11 2 . 164461446 211.72 CTTT CT... PASS 3/5 13 None None None None None None None None None FIGN|0.928037703|2.8%
View combined sample_47.variant11 3 rs879134715
dbSNP Clinvar 		62267213 646.03 CT CT... PASS 3/5 52 None None None None None None None None None PTPRG|0.93749185|2.57%
View combined sample_47.variant11 6 rs780114955,rs57207647
dbSNP Clinvar 		6167558 179.4 AT... AT... PASS 3/5 27 None None None None None None None None None F13A1|0.20134717|36.61%
View combined sample_47.variant11 8 . 26483998 937.55 AA... AA... PASS 3/5 33 None None None None None None None None None DPYSL2|0.481859756|16.66%
View combined sample_47.variant11 12 . 7818348 1645.5 GA... GA... PASS 3/5 36 None None None None None None None None None APOBEC1|0.005430298|85.3%
View combined sample_47.variant11 22 rs143929428,rs59571998
dbSNP Clinvar 		38169992 231.76 T TA... PASS 3/5 13 None None None None None None None None None TRIOBP|0.083019472|54.57%
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