SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 12
Number of Genes: 1

Export to: CSV
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KCNN3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_44.variant8 1 . 154842199 2072.81 GG... GG... PASS 5/1 35 CODON_INSERTION MODERATE None None None None None None None KCNN3|0.329640894|25.51%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View combined sample_44.variant8 2 rs377057460
dbSNP Clinvar
7170388 409.88 CT... CT... PASS 5/1 28 None None None None None None None None None RNF144A|0.230316059|33.35%
View combined sample_44.variant8 4 rs781287624
dbSNP Clinvar
68214270 399.23 GA... GA... PASS 5/1 13 None None None None None None None None None None
View combined sample_44.variant8 6 rs199947116,rs55996743,rs796265622
dbSNP Clinvar
33173748 529.56 CAGAG CA... PASS 5/1 34 None None None None None None None None None HSD17B8|0.095490496|52.02%
View combined sample_44.variant8 20 . 33059478 211.9 GG... GG... PASS 5/1 21 None None None None None None None None None ITCH|0.752501913|7.04%
View combined sample_44.variant8 20 . 52103811 3694.58 CA... CA... PASS 5/1 234 None None None None None None None None None TSHZ2|0.7161444|8.09%
View combined sample_44.variant8 1 . 202563829 498.81 TAC TA... PASS 5/1 22 None None None None None None None None None SYT2|0.326014466|25.75%
View combined sample_44.variant8 X rs878979493
dbSNP Clinvar
106184601 497.96 TG... TG... PASS 5/1 28 None None None None None None None None None MORC4|0.183658843|38.58%
View combined sample_44.variant8 1 . 51905949 2181.46 CT... CT... PASS 5/1 56 None None None None None None None None None EPS15|0.768298767|6.64%
View combined sample_44.variant8 11 rs200520008
dbSNP Clinvar
93211879 808.62 GC... GC... PASS 5/1 27 None None None None None None None None None SMCO4|0.424382303|19.38%
View combined sample_44.variant8 2 rs762517173
dbSNP Clinvar
210598184 3837.77 CC... CC... PASS 5/1 129 None None None None None None None None None MAP2|0.886986794|3.8%
View combined sample_44.variant8 11 rs370786608,rs754602519
dbSNP Clinvar
124007398 586.97 CC... CC... PASS 5/1 17 None None None None None None None None None VWA5A|0.013022691|78.5%
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