SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

CYP4V2,
CYP4V2 Bietti crystalline corneoretinal dystrophy, 210370 (3)

Genes at Clinical Genomics Database

CYP4V2,
CYP4V2 Bietti crystalline corneoretinal dystrophy
Retinitis pigmentosa, autosomal recessive

Genes at HGMD

Summary

Number of Variants: 12
Number of Genes: 1

Export to: CSV
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CYP4V2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 12066_s20 4 rs13146272
dbSNP Clinvar
187120211 100.0 C A PASS 0/1 77 NON_SYNONYMOUS_CODING MODERATE None 0.55931 0.55930 0.37175 1.00 0.00 None None None None None None CYP4V2|0.027940176|70.46%
View 12066_s20 4 rs34331648
dbSNP Clinvar
187118720 100.0 G A PASS 0/1 41 NON_SYNONYMOUS_CODING MODERATE None 0.02037 0.02037 0.02891 0.36 0.01 None None None None None None CYP4V2|0.027940176|70.46%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 12066_s20 4 rs4862662
dbSNP Clinvar
187118662 100.0 G T PASS 0/1 41 None None None 0.31190 0.31190 0.39220 None None None None None None CYP4V2|0.027940176|70.46%
View 12066_s20 4 rs10013653
dbSNP Clinvar
187115632 100.0 C A PASS 0/1 55 None None None 0.40395 0.40400 0.48508 None None None None None None CYP4V2|0.027940176|70.46%
View 12066_s20 4 rs3115310
dbSNP Clinvar
121774515 100.0 T C PASS 0/1 55 None None None 0.20487 0.20490 None None None None None None PRDM5|0.189342478|37.9%
View 12066_s20 4 rs2136998
dbSNP Clinvar
121737767 100.0 G A PASS 0/1 57 None None None 0.39577 0.39580 0.37044 None None None None None None PRDM5|0.189342478|37.9%
View 12066_s20 4 rs5861493,rs3838231
dbSNP Clinvar
121732339 100.0 A AT PASS 0/1 38 None None None 0.35863 0.35860 None None None None None None PRDM5|0.189342478|37.9%
View 12066_s20 4 rs1511310
dbSNP Clinvar
121720781 82.0 G T PASS 0/1 13 None None None 0.11641 0.11640 0.11150 None None None None None None PRDM5|0.189342478|37.9%
View 12066_s20 4 . 121631395 100.0 TAC CAT PASS 0/1 30 None None None None None None None None None PRDM5|0.189342478|37.9%
View 12066_s20 4 rs2102575
dbSNP Clinvar
187131504 100.0 G A PASS 1/1 67 None None None 0.91034 0.91030 None None None None None None CYP4V2|0.027940176|70.46%,KLKB1|0.016624072|76.14%
View 12066_s20 4 rs200162265
dbSNP Clinvar
121631377 100.0 C T PASS 0/1 30 None None None None None None None None None PRDM5|0.189342478|37.9%
View 12066_s20 4 rs2276917
dbSNP Clinvar
187129995 100.0 A G PASS 0/1 75 None None None 0.36941 0.36940 0.36599 None None None None None None CYP4V2|0.027940176|70.46%
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