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SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
 GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
 EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE 		MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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+ Genes

Genes:

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 5
Number of Genes: 0

Export to: CSV
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Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View pep_0060 4 rs140772303
dbSNP Clinvar 		10100552 19070.73 TC... T . 1/1 241 MOTIF[MA0059.1:Cmyc] LOW None 0.00499 0.00499 None None None None None None WDR1|0.129070667|46.02%
View pep_0060 9 . 7799393 270.73 G GC . 0/1 128 MOTIF[MA0059.1:Cmyc] LOW None None None None None None None TMEM261|0.003890901|87.18%
View pep_0060 19 rs36615
dbSNP Clinvar 		54705207 1072.77 G A . 0/1 110 MOTIF[MA0059.1:Cmyc] LOW None 0.19129 0.19130 None None None None None None RPS9|0.191676848|37.63%
View pep_0060 10 . 63525674 77.73 G GT . 0/1 85 MOTIF[MA0059.1:Cmyc] LOW None None None None None None None C10orf107|0.277213376|29.34%
View pep_0060 17 . 4614058 64.87 C CG . 1/1 5 MOTIF[MA0059.1:Cmyc] LOW None None None None None None None ARRB2|0.726219786|7.8%
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