SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
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SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
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Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 68
Number of Genes: 1

Export to: CSV
  • Page 1 of 1

NCR3LG1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View c005_attactcg-cctatcct srt mkdups flt 11 . 17388736 222.0 C T . 1/1 0 NON_SYNONYMOUS_CODING MODERATE None 0.00 0.99 None None None None None None NCR3LG1|0.000629432|97.69%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View c005_attactcg-cctatcct srt mkdups flt 11 . 17386857 222.0 C T . 1/1 0 None None None None None None None None None NCR3LG1|0.000629432|97.69%
View c005_attactcg-cctatcct srt mkdups flt 11 . 123642798 153.0 C T . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 126003744 192.0 G T . 1/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 126005619 136.0 G A . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 rs569498839
dbSNP Clinvar
793397 151.0 C A . 0/1 0 None None None 0.00040 0.00040 None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 1753436 225.0 T C . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 1754794 140.0 TCCC TCC . 1/1 0 None None None None None None None None None IFITM10|0.010810325|80.26%
View c005_attactcg-cctatcct srt mkdups flt 11 . 1757091 144.0 C T . 0/1 0 None None None None None None None None None IFITM10|0.010810325|80.26%
View c005_attactcg-cctatcct srt mkdups flt 11 . 6159689 126.0 T C . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 6615069 225.0 A G . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 6615669 152.0 G C . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 6616287 222.0 A G . 1/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 6619638 187.0 A G . 0/1 0 None None None None None None None None None RRP8|0.093494213|52.47%
View c005_attactcg-cctatcct srt mkdups flt 11 . 17772891 106.0 A G . 0/1 0 None None None None None None None None None KCNC1|0.741230536|7.34%
View c005_attactcg-cctatcct srt mkdups flt 11 . 49098815 225.0 A C . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 72158992 225.0 A G . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 72159442 225.0 T C . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 72159587 225.0 C T . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 72172496 222.0 G A . 1/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 72195085 190.0 C G . 1/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 72195177 225.0 T G . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 89731296 181.0 C G . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 89732601 222.0 T G . 1/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 89732662 109.0 G A . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 89733564 225.0 C A . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 89897753 16.1 T C . 0/1 0 None None None None None None None None None NAALAD2|0.080206845|55.11%
View c005_attactcg-cctatcct srt mkdups flt 11 . 89897800 14.2 T C . 0/1 0 None None None None None None None None None NAALAD2|0.080206845|55.11%
View c005_attactcg-cctatcct srt mkdups flt 11 . 112961806 144.0 G A . 0/1 0 None None None None None None None None None NCAM1|0.995998055|0.75%
View c005_attactcg-cctatcct srt mkdups flt 11 . 113003724 225.0 A G . 0/1 0 None None None None None None None None None NCAM1|0.995998055|0.75%
View c005_attactcg-cctatcct srt mkdups flt 11 . 113003923 225.0 C A . 0/1 0 None None None None None None None None None NCAM1|0.995998055|0.75%
View c005_attactcg-cctatcct srt mkdups flt 11 . 113202332 124.0 G T . 0/1 0 None None None None None None None None None TTC12|0.113173668|48.63%
View c005_attactcg-cctatcct srt mkdups flt 11 . 113202638 155.0 T G . 0/1 0 None None None None None None None None None TTC12|0.113173668|48.63%
View c005_attactcg-cctatcct srt mkdups flt 11 . 113214666 192.0 G T . 0/1 0 None None None None None None None None None TTC12|0.113173668|48.63%
View c005_attactcg-cctatcct srt mkdups flt 11 . 113214726 166.0 T C . 0/1 0 None None None None None None None None None TTC12|0.113173668|48.63%
View c005_attactcg-cctatcct srt mkdups flt 11 . 113232537 225.0 C T . 0/1 0 None None None None None None None None None TTC12|0.113173668|48.63%
View c005_attactcg-cctatcct srt mkdups flt 11 . 113262622 117.0 A G . 0/1 0 None None None None None None None None None ANKK1|0.031328783|68.87%
View c005_attactcg-cctatcct srt mkdups flt 11 . 113262954 225.0 T G . 0/1 0 None None None None None None None None None ANKK1|0.031328783|68.87%
View c005_attactcg-cctatcct srt mkdups flt 11 . 113271600 187.0 G T . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 113272030 187.0 G A . 1/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 113272835 181.0 C T . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 118141061 179.0 G A . 1/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 118143631 217.0 G GG... . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 118143772 225.0 G C . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 118145353 208.0 C T . 1/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 118167098 222.0 G T . 1/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 123633965 146.0 C G . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 123634251 225.0 C G . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 123634391 109.0 C T . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 rs145542780
dbSNP Clinvar
123653681 225.0 A G . 0/1 0 None None None 0.00020 0.00020 None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 125978524 149.0 A C . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 125978587 113.0 T C . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 125978626 91.0 T A . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 125980986 225.0 C G . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 125981405 123.0 T C . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 125981516 83.0 A G . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 125983664 144.0 T C . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 125989512 154.0 G T . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 125989888 124.0 T C . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 125994595 133.0 G C . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 125995077 217.0 AA... AA... . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 rs184285427
dbSNP Clinvar
125995118 153.0 A G . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 125997158 222.0 G T . 1/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 126001516 168.0 CAGAG CAG . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 126001558 150.0 T C . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 126001659 225.0 C A . 0/1 0 None None None None None None None None None None
View c005_attactcg-cctatcct srt mkdups flt 11 . 17386704 156.0 G A . 1/1 0 None None None None None None None None None NCR3LG1|0.000629432|97.69%
View c005_attactcg-cctatcct srt mkdups flt 11 . 126002060 116.0 A G . 0/1 0 None None None None None None None None None None
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