+ Filter Options

SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
 GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
 EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE 		MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

+ Genes 1

Genes:
STK36,

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 580
Number of Genes: 1

Export to: CSV

STK36
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 552017_ngs_ex 2 . 219562673 0.0 G A PASS 0/1 12 None None None None None None None None None STK36|0.159611866|41.62%
View 552017_ngs_ex 2 . 219558052 0.0 A G PASS 0/1 95 None None None None None None None None None STK36|0.159611866|41.62%
View 552017_ngs_ex 2 . 219554617 0.0 T C PASS 1/1 107 None None None None None None None None None STK36|0.159611866|41.62%
View 552017_ngs_ex 2 . 219562625 0.0 G T PASS 0/1 30 None None None 0.00 0.87 None None None None None None STK36|0.159611866|41.62%
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View 552017_ngs_ex 2 . 65071705 0.0 A G PASS 0/1 204 None None None None None None None None None None
View 552017_ngs_ex 2 . 68645939 0.0 A G sbF 0/1 97 None None None None None None None None None None
View 552017_ngs_ex 2 . 68655336 0.0 T C PASS 0/1 20 None None None None None None None None None None
View 552017_ngs_ex 2 . 69245344 0.0 G A sbR 1/1 26 None None None None None None None None None ANTXR1|0.389242389|21.46%
View 552017_ngs_ex 2 . 69326243 0.0 GA G PASS 0/1 38 None None None None None None None None None ANTXR1|0.389242389|21.46%
View 552017_ngs_ex 2 . 74886662 0.0 C G PASS 0/1 54 None None None None None None None None None SEMA4F|0.085117357|54.15%
View 552017_ngs_ex 2 . 74887981 0.0 A G PASS 1/1 66 None None None None None None None None None SEMA4F|0.085117357|54.15%
View 552017_ngs_ex 2 . 85309292 0.0 G A PASS 0/1 108 None None None None None None None None None None
View 552017_ngs_ex 2 . 85553008 0.0 G A PASS 1/1 75 None None None None None None None None None TGOLN2|0.000615886|97.82%
View 552017_ngs_ex 2 . 85553413 0.0 C T PASS 1/1 75 None None None None None None None None None TGOLN2|0.000615886|97.82%
View 552017_ngs_ex 2 . 111858311 0.0 C G sbF 0/1 55 None None None None None None None None None ACOXL|0.057491176|60.56%
View 552017_ngs_ex 2 . 111858356 0.0 T C sbF 0/1 79 None None None None None None None None None ACOXL|0.057491176|60.56%
View 552017_ngs_ex 2 . 111862404 0.0 G A sbF 0/1 77 None None None None None None None None None ACOXL|0.057491176|60.56%
View 552017_ngs_ex 2 . 112779646 0.0 C A PASS 0/1 14 None None None None None None None None None MERTK|0.05411075|61.44%
View 552017_ngs_ex 2 . 112832813 0.0 G A PASS 0/1 15 None None None None None None None None None TMEM87B|0.108271211|49.54%
View 552017_ngs_ex 2 . 113132727 0.0 T C sbF 0/1 126 None None None None None None None None None RGPD8|0.009279101|81.47%
View 552017_ngs_ex 2 . 114461951 0.0 G A PASS 0/1 136 None None None None None None None None None None
View 552017_ngs_ex 2 . 115739903 0.0 A G PASS 1/1 55 None None None None None None None None None DPP10|0.841965077|4.84%
View 552017_ngs_ex 2 . 115753241 0.0 G C PASS 0/1 92 None None None None None None None None None DPP10|0.841965077|4.84%
View 552017_ngs_ex 2 . 115768384 0.0 G A PASS 1/1 122 None None None None None None None None None DPP10|0.841965077|4.84%
View 552017_ngs_ex 2 . 115842351 0.0 T C PASS 1/1 63 None None None None None None None None None DPP10|0.841965077|4.84%
View 552017_ngs_ex 2 . 127635113 0.0 C T sbF 0/1 98 None None None None None None None None None None
View 552017_ngs_ex 2 . 127635714 0.0 T C sbF 0/1 40 None None None None None None None None None None
View 552017_ngs_ex 2 . 168923739 0.0 C T PASS 0/1 106 None None None None None None None None None STK39|0.757526204|6.91%
View 552017_ngs_ex 2 . 168932506 0.0 T C PASS 0/1 72 None None None None None None None None None STK39|0.757526204|6.91%
View 552017_ngs_ex 2 . 178071887 0.0 C T PASS 1/1 117 None None None None None None None None None None
View 552017_ngs_ex 2 . 178432094 0.0 G A PASS 0/1 64 None None None None None None None None None None
View 552017_ngs_ex 2 . 189088782 0.0 C T PASS 0/1 55 None None None None None None None None None None
View 552017_ngs_ex 2 . 189565451 0.0 A G PASS 0/1 101 None None None None None None None None None None
View 552017_ngs_ex 2 . 189580468 0.0 G C PASS 0/1 52 None None None None None None None None None None
View 552017_ngs_ex 2 . 190296896 0.0 T C PASS 1/1 58 None None None None None None None None None None
View 552017_ngs_ex 2 . 190319749 0.0 A G PASS 1/1 109 None None None None None None None None None WDR75|0.306550917|27.12%
View 552017_ngs_ex 2 . 201733390 0.0 C T PASS 1/1 91 None None None None None None None None None None
View 552017_ngs_ex 2 . 201768859 0.0 A G PASS 0/1 87 None None None None None None None None None None
View 552017_ngs_ex 2 . 208345103 0.0 G A PASS 1/1 57 None None None None None None None None None None
View 552017_ngs_ex 2 . 208347983 0.0 G A PASS 1/1 38 None None None None None None None None None None
View 552017_ngs_ex 2 . 208350046 0.0 A G PASS 1/1 40 None None None None None None None None None None
View 552017_ngs_ex 2 . 208350862 0.0 A G PASS 1/1 50 None None None None None None None None None None
View 552017_ngs_ex 2 . 209978659 0.0 G A PASS 1/1 110 None None None None None None None None None None
View 552017_ngs_ex 2 . 210556728 0.0 A ATCT PASS 0/1 43 None None None None None None None None None MAP2|0.886986794|3.8%
View 552017_ngs_ex 2 . 211387139 0.0 T C PASS 0/1 88 None None None None None None None None None CPS1|0.827402852|5.16%
View 552017_ngs_ex 2 . 211424276 0.0 G A PASS 0/1 49 None None None None None None None None None CPS1|0.827402852|5.16%
View 552017_ngs_ex 2 . 211623939 0.0 A C PASS 0/1 58 None None None None None None None None None None
View 552017_ngs_ex 2 . 211705346 0.0 G A PASS 0/1 60 None None None None None None None None None None
View 552017_ngs_ex 2 . 213317376 0.0 A T PASS 0/1 76 None None None None None None None None None ERBB4|0.999481457|0.34%
View 552017_ngs_ex 2 . 213364068 0.0 C T PASS 1/1 37 None None None None None None None None None ERBB4|0.999481457|0.34%
View 552017_ngs_ex 2 . 213862497 0.0 A C PASS 0/1 132 None None None None None None None None None None
View 552017_ngs_ex 2 . 213930019 0.0 A C PASS 0/1 104 None None None None None None None None None IKZF2|0.914200502|3.13%
View 552017_ngs_ex 2 . 215384864 0.0 C T PASS 1/1 74 None None None None None None None None None VWC2L|0.888840699|3.72%
View 552017_ngs_ex 2 . 215404486 0.0 T G sbF 1/1 57 None None None None None None None None None VWC2L|0.888840699|3.72%
View 552017_ngs_ex 2 . 215404531 0.0 T G sbF 1/1 39 None None None None None None None None None VWC2L|0.888840699|3.72%
View 552017_ngs_ex 2 . 215408177 0.0 T G sbF 1/1 64 None None None None None None None None None VWC2L|0.888840699|3.72%
View 552017_ngs_ex 2 . 165313617 0.0 T C sbF 1/1 47 None None None None None None None None None None
View 552017_ngs_ex 2 . 215435759 0.0 T A PASS 0/1 101 None None None None None None None None None VWC2L|0.888840699|3.72%
View 552017_ngs_ex 2 . 216039296 0.0 A T PASS 0/1 79 None None None None None None None None None None
View 552017_ngs_ex 2 . 216148178 0.0 A G PASS 1/1 122 None None None None None None None None None None
View 552017_ngs_ex 2 . 216676859 0.0 T C PASS 1/1 76 None None None None None None None None None None
View 552017_ngs_ex 2 . 218164616 0.0 C T PASS 0/1 185 None None None None None None None None None DIRC3|0.003364433|87.98%
View 552017_ngs_ex 2 . 218389899 0.0 A G sbF 1/1 51 None None None None None None None None None DIRC3|0.003364433|87.98%
View 552017_ngs_ex 2 . 218828067 0.0 A AG PASS 0/1 71 None None None None None None None None None TNS1|0.891163744|3.64%
View 552017_ngs_ex 2 . 219565481 0.0 C T PASS 1/1 59 None None None None None None None None None STK36|0.159611866|41.62%
View 552017_ngs_ex 2 . 219566909 0.0 G T sbF 0/1 28 None None None None None None None None None STK36|0.159611866|41.62%
View 552017_ngs_ex 2 . 219567292 0.0 G A sbF 0/1 45 None None None None None None None None None STK36|0.159611866|41.62%
View 552017_ngs_ex 2 . 219574956 0.0 C T PASS 0/1 92 None None None None None None None None None None
View 552017_ngs_ex 2 . 219629396 0.0 A C PASS 1/1 92 None None None None None None None None None None
View 552017_ngs_ex 2 . 219635704 0.0 A G sbF 1/1 58 None None None None None None None None None None
View 552017_ngs_ex 2 . 219637645 0.0 A C sbF 1/1 67 None None None None None None None None None None
View 552017_ngs_ex 2 . 219640543 0.0 T C PASS 1/1 116 None None None None None None None None None None
View 552017_ngs_ex 2 . 227089883 0.0 G A PASS 0/1 58 None None None None None None None None None None
View 552017_ngs_ex 2 . 227246719 0.0 T C PASS 0/1 35 None None None None None None None None None None
View 552017_ngs_ex 2 . 227248459 0.0 A G PASS 0/1 83 None None None None None None None None None None
View 552017_ngs_ex 2 . 227256385 0.0 G T PASS 0/1 45 None None None None None None None None None None
View 552017_ngs_ex 2 . 227270915 0.0 C T PASS 0/1 148 None None None None None None None None None None
View 552017_ngs_ex 2 . 227329764 0.0 A T sbF 0/1 43 None None None None None None None None None None
View 552017_ngs_ex 2 . 227329765 0.0 G T sbF 0/1 44 None None None None None None None None None None
View 552017_ngs_ex 2 . 227696084 0.0 GA G PASS 0/1 57 None None None None None None None None None None
View 552017_ngs_ex 2 . 229804142 0.0 T C PASS 0/1 91 None None None None None None None None None PID1|0.348334704|24.27%
View 552017_ngs_ex 2 . 233682693 0.0 G A PASS 0/1 14 None None None None None None None None None GIGYF2|0.544298923|14.01%
View 552017_ngs_ex 2 . 233713134 0.0 T C PASS 0/1 12 None None None None None None None None None GIGYF2|0.544298923|14.01%
View 552017_ngs_ex 2 . 233713141 0.0 C G PASS 0/1 11 None None None None None None None None None GIGYF2|0.544298923|14.01%
View 552017_ngs_ex 2 . 233713415 0.0 C A PASS 0/1 13 None None None None None None None None None GIGYF2|0.544298923|14.01%
View 552017_ngs_ex 2 . 233713464 0.0 C G PASS 0/1 22 None None None None None None None None None GIGYF2|0.544298923|14.01%
View 552017_ngs_ex 2 . 233713733 0.0 C A PASS 0/1 24 None None None None None None None None None GIGYF2|0.544298923|14.01%
View 552017_ngs_ex 2 . 233713736 0.0 G C PASS 0/1 25 None None None None None None None None None GIGYF2|0.544298923|14.01%
View 552017_ngs_ex 2 . 233713766 0.0 G C PASS 0/1 24 None None None None None None None None None GIGYF2|0.544298923|14.01%
View 552017_ngs_ex 2 . 233713774 0.0 T C PASS 0/1 21 None None None None None None None None None GIGYF2|0.544298923|14.01%
View 552017_ngs_ex 2 . 233713783 0.0 T C PASS 0/1 20 None None None None None None None None None GIGYF2|0.544298923|14.01%
View 552017_ngs_ex 2 . 233719268 0.0 T C PASS 0/1 12 None None None None None None None None None GIGYF2|0.544298923|14.01%
View 552017_ngs_ex 2 . 233719624 0.0 G A PASS 0/1 16 None None None None None None None None None GIGYF2|0.544298923|14.01%
View 552017_ngs_ex 2 . 233729157 0.0 T C sbF 0/1 12 None None None None None None None None None C2orf82|0.029390832|69.66%
View 552017_ngs_ex 2 . 233729207 0.0 G A sbF 0/1 15 None None None None None None None None None C2orf82|0.029390832|69.66%
View 552017_ngs_ex 2 . 233729603 0.0 A G sbF 0/1 26 None None None None None None None None None C2orf82|0.029390832|69.66%
View 552017_ngs_ex 2 . 239090021 0.0 T C sbF 0/1 55 None None None None None None None None None ILKAP|0.155452908|42.23%
View 552017_ngs_ex 2 . 239108040 0.0 T C sbF 1/1 136 None None None None None None None None None ILKAP|0.155452908|42.23%
View 552017_ngs_ex 2 . 239144721 0.0 A G PASS 1/1 173 None None None None None None None None None None
View 552017_ngs_ex 2 . 239961190 0.0 TG T PASS 0/1 58 None None None None None None None None None None