SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes at Omim

CACNA1D, CDH15, CNGA1, DOCK8, EYA4, FCGR2A, FLG2, FLT4, FUT2, HLA-A, INPP5K, KMT2C, RGS9, SCN1A, SIK3, SLC17A5, SRPX2, TG,
CACNA1D Primary aldosteronism, seizures, and neurologic abnormalities, 615474 (3)
Sinoatrial node dysfunction and deafness, 614896 (3)
CDH15 Mental retardation, autosomal dominant 3, 612580 (3)
CNGA1 Retinitis pigmentosa 49, 613756 (3)
DOCK8 Hyper-IgE recurrent infection syndrome, autosomal recessive, 243700 (3)
EYA4 Deafness, autosomal dominant 10, 601316 (3)
?Cardiomyopathy, dilated, 1J, 605362 (3)
FCGR2A {Lupus nephritis, susceptibility to}, 152700 (3)
{Malaria, severe, susceptibility to}, 611162 (3)
{Pseudomonas aeruginosa, susceptibility to chronic infection by, in cystic fibrosis}, 219700 (3)
FLG2 Peeling skin syndrome 6, 618084 (3)
FLT4 Hemangioma, capillary infantile, somatic, 602089 (3)
Lymphatic malformation 1, 153100 (3)
FUT2 {Norwalk virus infection, resistance to} (3)
{Vitamin B12 plasma level QTL1}, 612542 (3)
[Bombay phenotype, digenic], 616754 (3)
HLA-A {Hypersensitivity syndrome, carbamazepine-induced, susceptibility to}, 608579 (3)
INPP5K Muscular dystrophy, congenital, with cataracts and intellectual disability, 617404 (3)
KMT2C Kleefstra syndrome 2, 617768 (3)
RGS9 Bradyopsia, 608415 (3)
SCN1A Epilepsy, generalized, with febrile seizures plus, type 2, 604403 (3)
Epileptic encephalopathy, early infantile, 6 (Dravet syndrome), 607208 (3)
Febrile seizures, familial, 3A, 604403 (3)
Migraine, familial hemiplegic, 3, 609634 (3)
SIK3 ?Spondyloepimetaphyseal dysplasia, Krakow type, 618162 (3)
SLC17A5 Salla disease, 604369 (3)
Sialic acid storage disorder, infantile, 269920 (3)
SRPX2 ?Rolandic epilepsy, mental retardation, and speech dyspraxia, 300643 (3)
TG Thyroid dyshormonogenesis 3, 274700 (3)
{Autoimmune thyroid disease, susceptibility to, 3}, 608175 (3)

Genes at Clinical Genomics Database

CACNA1D, CDH15, CNGA1, DOCK8, EYA4, FLT4, HLA-A, RGS9, SCN1A, SLC17A5, SRPX2, TG,
CACNA1D Primary aldosteronism, seizures, and neurologic abnormalities
Sinoatrial node dysfunction and deafness
CDH15 Mental retardation, autosomal dominant 3
CNGA1 Retinitis pigmentosa 49
DOCK8 Hyper-IgE recurrent infection syndrome, autosomal recessive
EYA4 Cardiomyopathy, dilated, 1J
FLT4 Lymphedema, hereditary I (Milory disease)
HLA-A Drug-induced toxicity, susceptibility to
RGS9 Bradyopsia
SCN1A Migraine, familial hemiplegic 3
SLC17A5 Infantile sialic acid storage disorder
Sialuria, Finnish type (Salla disease)
SRPX2 Rolandic epilepsy, mental retardation, and speech dyspraxia
TG Thyroid dyshormonogenesis 3

Genes at HGMD

Summary

Number of Variants: 83
Number of Genes: 80

Export to: CSV
  • Page 1 of 1

ADAMTS8

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 11 rs199760382
dbSNP Clinvar
130276014 394.97 G T FDRtranche1.00to10.00+ 0/1 78 STOP_GAINED HIGH None None None None None None None ADAMTS8|0.042125202|65.07%

AKR1E2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 10 rs12240276
dbSNP Clinvar
4889403 9782.64 C T PASS 0/1 465 STOP_GAINED HIGH None 0.07847 0.07847 0.10964 None None None None None None AKR1E2|0.003819928|87.28%

ANAPC1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 2 rs72936240
dbSNP Clinvar
112614429 1747.84 G A PASS 0/1 232 STOP_GAINED HIGH None None None None None None None ANAPC1|0.14646446|43.53%

C1orf194

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs746312386
dbSNP Clinvar
109650648 28.84 A T ESPStandard;HARD_TO_VALIDATE;LowQual 0/1 6 STOP_GAINED HIGH None None None None None None None C1orf194|0.02567423|71.47%

CACNA1D

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 3 rs201865160
dbSNP Clinvar
53839025 340.56 C A FDRtranche1.00to10.00+ 0/1 228 STOP_GAINED HIGH None None None None None None None CACNA1D|0.678487804|9.14%

CARM1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 19 rs201539135
dbSNP Clinvar
11019790 138.27 C A FDRtranche1.00to10.00+ 0/1 67 STOP_GAINED HIGH None None None None None None None CARM1|0.523794567|14.83%

CCHCR1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 6 rs3130453
dbSNP Clinvar
31124849 1841.36 C T PASS 0/1 107 STOP_GAINED HIGH None 0.46925 0.46920 0.48507 None None None None None None CCHCR1|0.032661886|68.3%

CDC27

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 17 rs73319503
dbSNP Clinvar
45247362 351.69 G A PASS 0/1 81 STOP_GAINED HIGH None None None None None None None CDC27|0.658499283|9.78%
View na12878 recessive 17 rs77685276
dbSNP Clinvar
45214558 8316.76 G A FDRtranche1.00to10.00+ 0/1 429 STOP_GAINED HIGH None None None None None None None CDC27|0.658499283|9.78%
View na12878 recessive 17 rs62077264
dbSNP Clinvar
45234360 147561.0 A C FDRtranche1.00to10.00+ 1/1 3708 STOP_GAINED HIGH None None None None None None None CDC27|0.658499283|9.78%
View na12878 recessive 17 rs75204938
dbSNP Clinvar
45234486 1948.3 A C ESPStandard;SnpCluster 0/1 99 STOP_GAINED HIGH None None None None None None None CDC27|0.658499283|9.78%

CDH15

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 16 rs2270416
dbSNP Clinvar
89261482 155.22 C A PASS 0/1 17 STOP_GAINED HIGH None 0.07508 0.07508 0.03649 None None None None None None CDH15|0.019027782|74.65%

CDRT15

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 17 rs11651890
dbSNP Clinvar
14140081 541.46 G A FDRtranche1.00to10.00+ 0/1 119 STOP_GAINED HIGH None None None None None None None CDRT15|0.000811376|96.58%

CGNL1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 15 . 57838434 11.51 T A ESPStandard;LowQual 0/1 11 STOP_GAINED HIGH None None None None None None None CGNL1|0.036122677|67.07%

CNGA1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 4 rs201633176
dbSNP Clinvar
47938801 49.0 G T ESPStandard;LowQual 0/1 279 STOP_GAINED HIGH None None None None None None None NIPAL1|0.065350151|58.53%,CNGA1|0.095013818|52.11%

CPN2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 3 rs4974539
dbSNP Clinvar
194061907 916.21 G A PASS 0/1 69 STOP_GAINED HIGH None 0.28015 0.28020 0.34453 None None None None None None CPN2|0.013888065|77.95%

DOCK8

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 9 rs79568455
dbSNP Clinvar
463655 158.92 C A FDRtranche1.00to10.00+ 0/1 107 STOP_GAINED HIGH None None None None None None None DOCK8|0.209041054|35.69%

DSCAM

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 21 rs201894203
dbSNP Clinvar
41648091 153.04 G T FDRtranche1.00to10.00+ 0/1 108 STOP_GAINED HIGH None None None None None None None DSCAM|0.620706258|11.07%

ECHDC2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs72670819
dbSNP Clinvar
53370357 855.36 G T PASS 0/1 77 STOP_GAINED HIGH None 0.00020 0.00020 None None None None None None ECHDC2|0.032103864|68.56%

EYA4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 6 rs200471957
dbSNP Clinvar
133782271 16.07 C A ESPStandard;LowQual 0/1 243 STOP_GAINED HIGH None None None None None None None EYA4|0.884461407|3.86%

FAM211B

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 22 . 24981866 11.47 G T ESPStandard;LowQual 0/1 11 STOP_GAINED HIGH None None None None None None None SNRPD3|0.61591112|11.25%,GGT1|0.044291903|64.4%,LRRC75B|0.005788944|84.84%

FANK1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 10 rs202109621
dbSNP Clinvar
127585221 28.64 C T ESPStandard;LowQual 0/1 17 STOP_GAINED HIGH None None None None None None None FANK1|0.027790185|70.52%

FASN

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 17 rs775098665
dbSNP Clinvar
80046104 10.31 G T ESPStandard;LowQual 0/1 41 STOP_GAINED HIGH None None None None None None None FASN|0.307148829|27.07%

FCGR2A

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs9427397
dbSNP Clinvar
161476204 2695.0 C T PASS 0/1 189 STOP_GAINED HIGH None 0.05611 0.05611 0.09680 None None None None None None FCGR2A|0.010324745|80.62%

FCRL6

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs61823162
dbSNP Clinvar
159785413 4282.89 C T PASS 0/1 208 STOP_GAINED HIGH None 0.05771 0.05771 0.10080 None None None None None None FCRL6|0.001326512|93.71%

FLG2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs12568784
dbSNP Clinvar
152323132 7508.77 G T PASS 0/1 406 STOP_GAINED HIGH None 0.31689 0.31690 0.19345 None None None None None None FLG2|0.000542736|98.23%

FLT4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 5 rs200967921
dbSNP Clinvar
180058762 139.02 G T FDRtranche1.00to10.00+ 0/1 48 STOP_GAINED HIGH None None None None None None None FLT4|0.206670635|35.92%

FUT2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 19 rs601338
dbSNP Clinvar
49206674 3655.11 G A PASS 1/1 89 STOP_GAINED HIGH None 0.32169 0.32170 0.49346 None None None None None None FUT2|0.006958625|83.54%

HLA-A

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 6 rs9260156
dbSNP Clinvar
29911240 799.5 T A PASS 1/1 22 STOP_GAINED HIGH None 0.22863 0.22860 None None None None None None HLA-A|0.043055872|64.8%

HMGN5

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive X . 80370309 48.01 C A LowQual 1/1 2 STOP_GAINED HIGH None None None None None None None HMGN5|0.008497819|82.15%

HNRNPR

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs201164560
dbSNP Clinvar
23637469 283.54 G T FDRtranche1.00to10.00+ 0/1 121 STOP_GAINED HIGH None None None None None None None HNRNPR|0.8885534|3.73%

INPP5K

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 17 rs200661795
dbSNP Clinvar
1412603 31.74 G T ESPStandard;LowQual 0/1 157 STOP_GAINED HIGH None None None None None None None INPP5K|0.130172169|45.85%

KMT2C

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 7 rs146238849
dbSNP Clinvar
151962134 738.93 G T FDRtranche1.00to10.00+ 0/1 789 STOP_GAINED HIGH None None None None None None None KMT2C|0.088346598|53.58%

MAGEB16

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive X rs4829392
dbSNP Clinvar
35821127 2323.84 C T PASS 0/1 128 STOP_GAINED HIGH None 0.62040 0.62040 0.45504 None None None None None None MAGEB16|0.000965806|95.69%

MAP2K3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 17 rs55796947
dbSNP Clinvar
21204210 2199.89 C T PASS 0/1 316 STOP_GAINED HIGH None None None None None None None MAP2K3|0.4379498|18.79%

MOB3C

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs6671527
dbSNP Clinvar
47080679 8857.37 G A PASS 1/1 204 STOP_GAINED HIGH None 0.64217 0.64220 0.49877 None None None None None None MKNK1|0.390435521|21.38%,MOB3C|0.199575043|36.77%

NACA2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 17 rs17610181
dbSNP Clinvar
59667953 15711.2 G A PASS 0/1 731 STOP_GAINED HIGH None 0.14796 0.14800 0.12133 None None None None None None NACA2|0.016130697|76.39%

NCOR1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 17 rs78230791
dbSNP Clinvar
16068343 32.8 G A ESPStandard;HARD_TO_VALIDATE;LowQual 0/1 52 STOP_GAINED HIGH None None None None None None None NCOR1|0.942283614|2.42%

NRIP2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 12 rs73052628
dbSNP Clinvar
2943924 1167.27 G A PASS 0/1 82 STOP_GAINED HIGH None 0.00040 0.00040 0.00069 None None None None None None ITFG2|0.042941889|64.82%,NRIP2|0.025045243|71.76%

OR10J1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs12409540
dbSNP Clinvar
159410340 8037.67 T A PASS 0/1 395 STOP_GAINED HIGH None 0.08446 0.08446 0.10710 None None None None None None OR10J1|0.010947724|80.11%

OR1B1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 9 rs1476860
dbSNP Clinvar
125391241 1548.32 G A PASS 0/1 76 STOP_GAINED HIGH None 0.33926 0.33930 0.22697 None None None None None None OR1B1|0.014476392|77.51%

OR1J1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 9 rs45579335
dbSNP Clinvar
125239501 6666.98 G T PASS 0/1 347 STOP_GAINED HIGH None 0.00559 0.00559 0.01223 None None None None None None OR1J1|0.019223846|74.57%

OR2L8

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs10888281
dbSNP Clinvar
248113026 10196.3 T A PASS 1/1 251 STOP_GAINED HIGH None 0.74581 0.74580 0.25235 None None None None None None OR2L13|0.004043561|86.95%,OR2L8|0.001567189|92.47%

OR2T5

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs76332972
dbSNP Clinvar
248651959 1045.16 C T PASS 0/1 306 STOP_GAINED HIGH None None None None None None None OR2T5|0.002593105|89.5%

OR4C15

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 11 rs72908448
dbSNP Clinvar
55322818 4203.75 G T PASS 0/1 228 STOP_GAINED HIGH None 0.00080 0.00080 0.00154 None None None None None None OR4C15|0.003974906|87.07%

OR4C16

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 11 rs1459101
dbSNP Clinvar
55339652 6151.76 C T PASS 0/1 336 STOP_GAINED HIGH None 0.25260 0.25260 0.21941 None None None None None None OR4C16|0.00479956|86.1%

OR4C3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 11 rs72473368
dbSNP Clinvar
48347014 1783.82 G A PASS 0/1 221 STOP_GAINED HIGH None None None None None None None OR4C3|0.012915684|78.55%

OR4X1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 11 rs10838851
dbSNP Clinvar
48286231 18846.8 T A PASS 1/1 470 STOP_GAINED HIGH None 0.60423 0.60420 0.30936 None None None None None None OR4X1|0.01331956|78.29%

OR5AR1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 11 rs11228710
dbSNP Clinvar
56431216 15191.3 C T PASS 0/1 733 STOP_GAINED HIGH None 0.62300 0.62300 0.42966 None None None None None None OR5AR1|0.094213809|52.31%

OR5K2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 3 rs55639376
dbSNP Clinvar
98217178 5820.18 T A PASS 0/1 275 STOP_GAINED HIGH None 0.12380 0.12380 0.16741 None None None None None None OR5K2|0.005632487|85.07%,CLDND1|0.216463054|34.82%

PCMTD1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 8 rs75748152
dbSNP Clinvar
52733231 1667.36 G A FDRtranche1.00to10.00+ 0/1 277 STOP_GAINED HIGH None None None None None None None PCMTD1|0.383110671|21.84%

PDE4DIP

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs2762779
dbSNP Clinvar
145075683 265.46 C T PASS 0/1 53 STOP_GAINED HIGH None None None None None None None PDE4DIP|0.07469644|56.36%

PKD1L2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 16 rs7499011
dbSNP Clinvar
81242198 6063.81 G A PASS 0/1 312 STOP_GAINED HIGH None 0.16174 0.16170 0.29020 None None None None None None PKD1L2|0.005531409|85.17%

PLSCR1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 3 rs78850778
dbSNP Clinvar
146246596 36.3 G T ESPStandard;LowQual 0/1 16 STOP_GAINED HIGH None None None None None None None PLSCR1|0.016821115|76.02%

PNMT

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 17 rs201886594
dbSNP Clinvar
37826537 12.46 C A ESPStandard;LowQual 0/1 25 STOP_GAINED HIGH None None None None None None None PNMT|0.183062034|38.65%

PRAMEF1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs79698223
dbSNP Clinvar
12854090 9834.78 T A PASS 0/1 1152 STOP_GAINED HIGH None None None None None None None PRAMEF1|0.000484368|98.53%

RGS9

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 17 rs201059894
dbSNP Clinvar
63156391 31.38 C A ESPStandard;LowQual 0/1 86 STOP_GAINED HIGH None None None None None None None RGS9|0.076663554|55.97%

RHPN2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 19 rs78615454
dbSNP Clinvar
33490585 2639.38 G A PASS 0/1 338 STOP_GAINED HIGH None None None None None None None RHPN2|0.04493503|64.24%

SCN1A

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 2 rs78391141
dbSNP Clinvar
166904221 171.7 G T FDRtranche1.00to10.00+ 0/1 258 STOP_GAINED HIGH None None None None None None None SCN1A|0.679980249|9.08%

SHROOM3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 4 rs73826426
dbSNP Clinvar
77660829 12.3 C A ESPStandard;LowQual 0/1 74 STOP_GAINED HIGH None None None None None None None SHROOM3|0.017530473|75.58%

SIGLEC12

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 19 rs16982743
dbSNP Clinvar
52004903 6671.72 G A PASS 0/1 280 STOP_GAINED HIGH None 0.18590 0.18590 0.23335 None None None None None None SIGLEC12|0.000634247|97.66%

SIK3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 11 rs200134394
dbSNP Clinvar
116968937 41.3 G T ESPStandard;LowQual 0/1 17 STOP_GAINED HIGH None None None None None None None SIK3|0.354918273|23.8%

SKA3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 13 rs61950356
dbSNP Clinvar
21750538 156.97 G A PASS 0/1 31 STOP_GAINED HIGH None 0.07091 None None None None None None SKA3|0.032452417|68.4%

SLC17A5

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 6 rs200882814
dbSNP Clinvar
74351582 2338.19 G T FDRtranche1.00to10.00+ 0/1 386 STOP_GAINED HIGH None 0.16993 0.16990 None None None None None None SLC17A5|0.417436038|19.72%

SLC22A10

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 11 rs1790218
dbSNP Clinvar
63057925 9316.47 G A PASS 0/1 475 STOP_GAINED HIGH None 0.43351 0.43350 0.47938 None None None None None None SLC22A10|0.000698114|97.25%

SLC6A18

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 5 rs7447815
dbSNP Clinvar
1240757 659.24 C G PASS 0/1 45 STOP_GAINED HIGH None 0.00060 0.34860 0.36445 None None None None None None SLC6A18|0.029366379|69.67%

SLC9B1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 4 rs75599926
dbSNP Clinvar
103832611 725.93 G A FDRtranche1.00to10.00+ 0/1 163 STOP_GAINED HIGH None None None None None None None SLC9B1|0.003950683|87.1%

SRPX2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive X rs201362732
dbSNP Clinvar
99919874 381.73 C A FDRtranche1.00to10.00+ 0/1 53 STOP_GAINED HIGH None None None None None None None SRPX2|0.481043132|16.71%

SUSD2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 22 rs200827889
dbSNP Clinvar
24584027 59.98 C A FDRtranche1.00to10.00+ 0/1 24 STOP_GAINED HIGH None None None None None None None SUSD2|0.00455796|86.35%

TG

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 8 rs748211829
dbSNP Clinvar
133883642 312.55 C A FDRtranche1.00to10.00+ 0/1 380 STOP_GAINED HIGH None None None None None None None TG|0.245746493|31.95%

THEM6

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 8 . 143809240 37.01 C A LowQual 1/1 2 STOP_GAINED HIGH None None None None None None None THEM6|0.014885935|77.21%

TLR10

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 4 rs73236610
dbSNP Clinvar
38775922 4816.04 G T PASS 0/1 253 STOP_GAINED HIGH None 0.00020 0.00020 0.00008 None None None None None None TLR10|0.045687596|63.98%

TMC2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 20 rs200101078
dbSNP Clinvar
2575506 65.19 C A FDRtranche1.00to10.00+ 0/1 59 STOP_GAINED HIGH None None None None None None None TMC2|0.074484913|56.41%

TRAF5

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs200264560
dbSNP Clinvar
211545690 131.63 C A FDRtranche1.00to10.00+ 0/1 55 STOP_GAINED HIGH None None None None None None None TRAF5|0.170665184|40.21%

TTC4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 1 rs1147990
dbSNP Clinvar
55182300 5795.6 T A PASS 0/1 263 STOP_GAINED HIGH None 0.66833 0.66830 0.47509 0.27 0.00 None None None None None None TTC4|0.085109121|54.15%

UBE2NL

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive X rs237520
dbSNP Clinvar
142967468 6023.66 T G PASS 0/1 257 STOP_GAINED HIGH None 0.61748 0.61750 0.33314 None None None None None None UBE2NL|0.004200754|86.73%

UBE2O

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 17 rs200035390
dbSNP Clinvar
74387150 351.07 G T FDRtranche1.00to10.00+ 0/1 69 STOP_GAINED HIGH None None None None None None None UBE2O|0.124930945|46.63%

USP29

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 19 rs9973206
dbSNP Clinvar
57642782 10555.9 C A PASS 0/1 558 STOP_GAINED HIGH None 0.95208 0.95210 0.11704 None None None None None None USP29|0.000863165|96.27%

ZACN

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 17 rs1043149
dbSNP Clinvar
74077797 5324.17 C T PASS 0/1 266 STOP_GAINED HIGH None 0.18890 0.18890 0.15001 None None None None None None ZACN|0.001720136|91.81%,EXOC7|0.311837374|26.7%

ZDHHC12

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 9 . 131484731 25.09 G A ESPStandard;LowQual 0/1 7 STOP_GAINED HIGH None None None None None None None ZDHHC12|0.095085448|52.08%

ZNF117

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 7 rs1404453
dbSNP Clinvar
64438667 10727.2 G A PASS 1/1 246 STOP_GAINED HIGH None 0.88179 0.88180 0.10150 None None None None None None ZNF117|0.000669116|97.44%

ZNF772

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 19 rs73067111
dbSNP Clinvar
57987104 7034.9 C T PASS 0/1 313 STOP_GAINED HIGH None 0.00359 0.00359 0.00446 None None None None None None ZNF772|0.002951942|88.73%

ZNF80

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View na12878 recessive 3 rs3732781
dbSNP Clinvar
113955187 1745.25 A C PASS 0/1 90 STOP_GAINED HIGH None 0.18550 0.18550 0.20637 None None None None None None ZNF80|0.001570762|92.46%
  • Page 1 of 1