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SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
 GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
 EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
 CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP 		READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP 		ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE 		POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE 		MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
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+ Genes 1

Genes:
C12orf77,

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 5
Number of Genes: 1

Export to: CSV
  • Page 1 of 1

C12orf77
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View snps raw-snps 17_0233 12 rs864161
dbSNP Clinvar 		25148755 13722.9 C A,G . 2/2 165 None None None 0.01298 0.01298 0.03616 1.00 0.00 None None None None None None C12orf77|0.000505571|98.4%
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View snps raw-snps 17_0233 1 rs8658
dbSNP Clinvar 		156706559 2598.9 A C,G . 2/2 21 None None None 0.32089 0.32090 0.28395 None None None None None None RRNAD1|0.119124739|47.57%
View snps raw-snps 17_0233 2 rs1190432
dbSNP Clinvar 		233345249 1888.13 C A,T . 2/2 39 None None None 0.18231 0.18230 None None None None None None ECEL1|0.739911148|7.37%
View snps raw-snps 17_0233 22 rs807458
dbSNP Clinvar 		19220648 3925.13 G A,T . 2/2 32 None None None 0.05132 0.05132 0.36525 None None None None None None CLTCL1|0.022666116|72.86%
View snps raw-snps 17_0233 22 rs9617014
dbSNP Clinvar 		50901259 2986.9 G C,T . 2/2 67 None None None 0.00339 0.00340 0.44766 None None None None None None SBF1|0.055734272|61.01%
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