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Genes at Omim

AARS, ABAT, ABCA3, ABCC11, ABCC6, ACSF3, ADAMTS18, ANKRD11, ATP2A1, AXIN1, BBS2, CACNA1H, CD19, CDH1, CDH3, CDT1, CETP, CIITA, CLCN7, CNGB1, COG4, COG8, CRYM, CYBA, DHODH, DNAAF1, EARS2, FA2H, FUS, GALNS, GAN, GCSH, GFER, GLIS2, HSD11B2, HSD3B7, HYDIN, IFT140, IGFALS, IL4R, JPH3, KIF22, LMF1, MAF, MEFV, MMP2, MYH11, NOD2, PKD1, PLCG2, PRMT7, PRRT2, RPGRIP1L, SALL1, SCNN1G, SLC12A3, SLC6A2, SLX4, SRCAP, SSTR5, TAT, UMOD, VPS35, WWOX, XYLT1, ZFHX3, ZNF469,
AARS Charcot-Marie-Tooth disease, axonal, type 2N, 613287 (3)
Epileptic encephalopathy, early infantile, 29, 616339 (3)
ABAT GABA-transaminase deficiency, 613163 (3)
ABCA3 Surfactant metabolism dysfunction, pulmonary, 3, 610921 (3)
ABCC11 [Axillary odor, variation in], 117800 (3)
[Colostrum secretion, variation in], 117800 (3)
[Earwax, wet/dry], 117800 (3)
ABCC6 Arterial calcification, generalized, of infancy, 2, 614473 (3)
Pseudoxanthoma elasticum, 264800 (3)
Pseudoxanthoma elasticum, forme fruste, 177850 (3)
ACSF3 Combined malonic and methylmalonic aciduria, 614265 (3)
ADAMTS18 Microcornea, myopic chorioretinal atrophy, and telecanthus, 615458 (3)
ANKRD11 KBG syndrome, 148050 (3)
ATP2A1 Brody myopathy, 601003 (3)
AXIN1 Hepatocellular carcinoma, somatic, 114550 (3)
?Caudal duplication anomaly, 607864 (3)
BBS2 Bardet-Biedl syndrome 2, 615981 (3)
Retinitis pigmentosa 74, 616562 (3)
CACNA1H Hyperaldosteronism, familial, type IV, 617027 (3)
{Epilepsy, childhood absence, susceptibility to, 6}, 611942 (3)
{Epilepsy, idiopathic generalized, susceptibility to, 6}, 611942 (3)
CD19 Immunodeficiency, common variable, 3, 613493 (3)
CDH1 Gastric cancer, hereditary diffuse, with or without cleft lip and/or palate, 137215 (3)
Blepharocheilodontic syndrome 1, 119580 (3)
Endometrial carcinoma, somatic, 608089 (3)
{Prostate cancer, susceptibility to}, 176807 (3)
Ovarian cancer, somatic, 167000 (3)
{Breast cancer, lobular}, 114480 (3)
CDH3 Hypotrichosis, congenital, with juvenile macular dystrophy, 601553 (3)
Ectodermal dysplasia, ectrodactyly, and macular dystrophy, 225280 (3)
CDT1 Meier-Gorlin syndrome 4, 613804 (3)
CETP Hyperalphalipoproteinemia, 143470 (3)
[High density lipoprotein cholesterol level QTL 10], 143470 (3)
CIITA Bare lymphocyte syndrome, type II, complementation group A, 209920 (3)
{Rheumatoid arthritis, susceptibility to}, 180300 (3)
CLCN7 Osteopetrosis, autosomal dominant 2, 166600 (3)
Osteopetrosis, autosomal recessive 4, 611490 (3)
CNGB1 Retinitis pigmentosa 45, 613767 (3)
COG4 Congenital disorder of glycosylation, type IIj, 613489 (3)
Saul-Wilson syndrome, 618150 (3)
COG8 Congenital disorder of glycosylation, type IIh, 611182 (3)
CRYM Deafness, autosomal dominant 40, 616357 (3)
CYBA Chronic granulomatous disease, autosomal, due to deficiency of CYBA, 233690 (3)
DHODH Miller syndrome, 263750 (3)
DNAAF1 Ciliary dyskinesia, primary, 13, 613193 (3)
EARS2 Combined oxidative phosphorylation deficiency 12, 614924 (3)
FA2H Spastic paraplegia 35, autosomal recessive, 612319 (3)
FUS Amyotrophic lateral sclerosis 6, with or without frontotemporal dementia, 608030 (3)
Essential tremor, hereditary, 4, 614782 (3)
GALNS Mucopolysaccharidosis IVA, 253000 (3)
GAN Giant axonal neuropathy-1, 256850 (3)
GCSH ?Glycine encephalopathy, 605899 (3)
GFER Myopathy, mitochondrial progressive, with congenital cataract, hearing loss, and developmental delay, 613076 (3)
GLIS2 Nephronophthisis 7, 611498 (3)
HSD11B2 Apparent mineralocorticoid excess, 218030 (3)
HSD3B7 Bile acid synthesis defect, congenital, 1, 607765 (3)
HYDIN Ciliary dyskinesia, primary, 5, 608647 (3)
IFT140 Retinitis pigmentosa 80, 617781 (3)
Short-rib thoracic dysplasia 9 with or without polydactyly, 266920 (3)
IGFALS Acid-labile subunit, deficiency of, 615961 (3)
IL4R {AIDS, slow progression to}, 609423 (3)
{Atopy, susceptibility to}, 147050 (3)
JPH3 Huntington disease-like 2, 606438 (3)
KIF22 Spondyloepimetaphyseal dysplasia with joint laxity, type 2, 603546 (3)
LMF1 Lipase deficiency, combined, 246650 (3)
MAF Ayme-Gripp syndrome, 601088 (3)
Cataract 21, multiple types, 610202 (3)
MEFV Familial Mediterranean fever, AD, 134610 (3)
Familial Mediterranean fever, AR, 249100 (3)
MMP2 Multicentric osteolysis, nodulosis, and arthropathy, 259600 (3)
MYH11 Aortic aneurysm, familial thoracic 4, 132900 (3)
NOD2 Blau syndrome, 186580 (3)
{Inflammatory bowel disease 1, Crohn disease}, 266600 (3)
{Psoriatic arthritis, susceptibility to}, 607507 (2)
{Yao syndrome}, 617321 (3)
PKD1 Polycystic kidney disease 1, 173900 (3)
PLCG2 Familial cold autoinflammatory syndrome 3, 614468 (3)
Autoinflammation, antibody deficiency, and immune dysregulation syndrome, 614878 (3)
PRMT7 Short stature, brachydactyly, intellectual developmental disability, and seizures, 617157 (3)
PRRT2 Convulsions, familial infantile, with paroxysmal choreoathetosis, 602066 (3)
Episodic kinesigenic dyskinesia 1, 128200 (3)
Seizures, benign familial infantile, 2, 605751 (3)
RPGRIP1L COACH syndrome, 216360 (3)
Joubert syndrome 7, 611560 (3)
Meckel syndrome 5, 611561 (3)
SALL1 Townes-Brocks branchiootorenal-like syndrome, 107480 (3)
Townes-Brocks syndrome 1, 107480 (3)
SCNN1G Bronchiectasis with or without elevated sweat chloride 3, 613071 (3)
Liddle syndrome 2, 618114 (3)
Pseudohypoaldosteronism, type I, 264350 (3)
SLC12A3 Gitelman syndrome, 263800 (3)
SLC6A2 ?Orthostatic intolerance, 604715 (3)
SLX4 Fanconi anemia, complementation group P, 613951 (3)
SRCAP Floating-Harbor syndrome, 136140 (3)
SSTR5 Somatostatin analog, resistance to (3)
TAT Tyrosinemia, type II, 276600 (3)
UMOD Glomerulocystic kidney disease with hyperuricemia and isosthenuria, 609886 (3)
Hyperuricemic nephropathy, familial juvenile 1, 162000 (3)
Medullary cystic kidney disease 2, 603860 (3)
VPS35 {Parkinson disease 17}, 614203 (3)
WWOX Epileptic encephalopathy, early infantile, 28, 616211 (3)
Esophageal squamous cell carcinoma, somatic, 133239 (3)
Spinocerebellar ataxia, autosomal recessive 12, 614322 (3)
XYLT1 Desbuquois dysplasia 2, 615777 (3)
{Pseudoxanthoma elasticum, modifier of severity of}, 264800 (3)
ZFHX3 Prostate cancer, somatic, 176807 (3)
ZNF469 Brittle cornea syndrome 1, 229200 (3)

Genes at Clinical Genomics Database

AARS, ABAT, ABCA3, ABCC11, ABCC6, ACSF3, ADAMTS18, ANKRD11, ATP2A1, AXIN1, BBS2, CD19, CDH1, CDH3, CDT1, CETP, CIITA, CLCN7, CNGB1, COG4, COG8, CRYM, CYBA, DHODH, DNAAF1, EARS2, FA2H, FUS, GALNS, GAN, GCSH, GFER, GLIS2, HSD11B2, HSD3B7, IFT140, IGFALS, JPH3, KIF22, LMF1, MAF, MEFV, MMP2, MYH11, NOD2, PKD1, PLCG2, PRRT2, RPGRIP1L, SALL1, SCNN1G, SLC12A3, SLC6A2, SLX4, SRCAP, SSTR5, TAT, UMOD, VPS35, WWOX, XYLT1, ZNF469,
AARS Charcot-Marie-Tooth disease, axonal, type 2N
Epileptic encephalopathy, early infantile, 29
ABAT GABA-transaminase deficiency
ABCA3 Surfactant metabolism dysfunction, pulmonary, 3
Interstitial lung disease
ABCC11 Apocrine gland secretion, variation in
ABCC6 Pseudoxanthoma elasticum
ACSF3 Combined malonic and methylmalonic aciduria
ADAMTS18 Knobloch syndrome 2
Microcornea, myopic chorioretinal atrophy, and telecanthus
Retinal dystrophy, early onset, autosomal recessive
ANKRD11 KBG syndrome
ATP2A1 Brody myopathy
AXIN1 Caudal duplication anomaly
BBS2 Bardet-Biedl syndrome 2
Retinitis pigmentosa 74
CD19 Immunodeficiency, common variable 3
CDH1 CDH1-related cancer
CDH3 Hypotrichosis, congenital, with juvenile macular dystrophy
Ectodermal dysplasia, ectrodactyly, and macular dystrophy syndrome
CDT1 Meier-Gorlin syndrome 4
CETP Hyperalphalipoproteinemia 1
CIITA Bare lymphocyte syndrome, type II
CLCN7 Osteopetrosis, autosomal dominant 2
Osteopetrosis, autosomal recessive 4
CNGB1 Retinitis pigmentosa 45
COG4 Congenital disorder of glycosylation, type IIj
COG8 Congenital disorder of glycosylation, type IIh
CRYM Deafness, autosomal dominant 40
CYBA Chronic granulomatous disease, autosomal, due to deficiency of CYBA
DHODH Postaxial acrofacial dysostosis (Miller syndrome)
DNAAF1 Ciliary dyskinesia, primary, 13
EARS2 Combined oxidative phosphorylation deficiency 12
FA2H Spastic paraplegia 35, autosomal recessive
FUS Amyotrophic lateral sclerosis 6, with or without frontotemporal dementia
Essential tremor
GALNS Mucopolysaccharidosis IVA (Morquio syndrome A)
GAN Giant axonal neuropathy 1, autosomal recessive
GCSH Glycine encephalopathy
GFER Myopathy, mitochondrial progressive, with congenital cataract, hearing loss, and developmental delay
GLIS2 Nephronophthisis 7
HSD11B2 Cortisol 11-beta-ketoreductase deficiency
HSD3B7 Bile acid synthesis defect, congenital, 1
IFT140 Short-rib thoracic dysplasia 9 with or without polydactyly
IGFALS Insulin-like growth factor-binding protein, acid-labile subunit, deficiency of
JPH3 Huntington disease-like 2
KIF22 Spondyloepimetaphyseal dysplasia with joint laxity, type 2
LMF1 Combined lipase deficiency
MAF Ayme-Gripp syndrome
MEFV Familial Mediterranean fever
MMP2 Torg-Winchester syndrome
Multicentric osteolysis, nodulosis, and arthropathy
MYH11 Aortic aneurysm, familial thoracic 4
NOD2 Blau syndrome
Sarcoidosis, early-onset
PKD1 Polycystic kidney disease, adult type I
PLCG2 Familial cold autoinflammatory syndrome 3 (PLAID)
Autoinflammation, antibody deficiency, and immune dysregulation syndrome (APLAID)
PRRT2 Episodic kinesigenic dyskinesia 1
RPGRIP1L Meckel syndrome 5
Joubert syndrome 7
COACH syndrome
Retinal degeneration in ciliopathy, modifier of
SALL1 Townes-Brocks syndrome
SCNN1G Pseudohypoaldosteronism, type I
Liddle syndrome
Bronchiectasis with or without elevated sweat chloride 3
SLC12A3 Gitelman syndrome
SLC6A2 Orthostatic intolerance
SLX4 Fanconi anemia type P
SRCAP Floating-Harbor syndrome
SSTR5 Resistance to somatostatin treatment
TAT Tyrosinemia, type II
UMOD Familial juvenile hyperuricemic nephropathy
Glomerulocystic kidney disease with hyperuricemia and isosthenuria
VPS35 Parkinson disease 17
WWOX Epileptic encephalopathy, early infantile, 28
Spinocerebellar ataxia, autosomal recessive 12
XYLT1 Desbuquois dysplasia 2
ZNF469 Brittle cornea syndrome 1

Genes at HGMD

Summary

Number of Variants: 995
Number of Genes: 107

Export to: CSV

AARS

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs4081753
dbSNP Clinvar
70287177 0.0 A G PASS 1/1 82 SYNONYMOUS_CODING LOW None 0.88119 0.88120 0.15082 None None None None None None AARS|0.341353977|24.74%
View exome_all 16 rs2070203
dbSNP Clinvar
70303580 0.0 G A PASS 0/1 115 SYNONYMOUS_CODING LOW None 0.42532 0.42530 0.49077 None None None None None None AARS|0.341353977|24.74%

ABAT

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs1641022
dbSNP Clinvar
8868776 0.0 C A PASS 0/1 61 SYNONYMOUS_CODING LOW None 0.31749 0.31750 0.32261 None None None None None None ABAT|0.163825558|41.04%

ABCA3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs149532
dbSNP Clinvar
2331430 0.0 A G PASS 0/1 64 SYNONYMOUS_CODING LOW None 0.90096 0.90100 0.13058 None None None None None None ABCA3|0.043607901|64.64%

ABCC1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs35605
dbSNP Clinvar
16162019 0.0 T C PASS 0/1 151 SYNONYMOUS_CODING LOW None 0.78654 0.78650 0.15359 None None None None None None ABCC1|0.091540799|52.94%

ABCC11

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs16945974
dbSNP Clinvar
48256602 0.0 T C PASS 0/1 127 SYNONYMOUS_CODING LOW None 0.13419 0.13420 0.14700 None None None None None None ABCC11|0.006558104|83.99%
View exome_all 16 rs16945916
dbSNP Clinvar
48201432 0.0 T C PASS 0/1 104 NON_SYNONYMOUS_CODING MODERATE None 0.17013 0.17010 0.22581 1.00 0.00 None None None None None None ABCC11|0.006558104|83.99%
View exome_all 16 rs12443685
dbSNP Clinvar
48226479 0.0 C T PASS 0/1 36 SYNONYMOUS_CODING LOW None 0.13638 0.13640 0.14821 None None None None None None ABCC11|0.006558104|83.99%
View exome_all 16 rs16945988
dbSNP Clinvar
48265777 0.0 C T PASS 0/1 56 NON_SYNONYMOUS_CODING MODERATE None 0.11002 0.11000 0.12792 0.00 0.00 None None None None None None ABCC11|0.006558104|83.99%
View exome_all 16 rs8047091
dbSNP Clinvar
48248918 0.0 T C PASS 0/1 26 SYNONYMOUS_CODING LOW None 0.16993 0.16990 0.21051 None None None None None None ABCC11|0.006558104|83.99%
View exome_all 16 rs11866251
dbSNP Clinvar
48227862 0.0 G A PASS 0/1 55 SYNONYMOUS_CODING LOW None 0.13878 0.13880 0.18766 None None None None None None ABCC11|0.006558104|83.99%

ABCC6

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs9930886
dbSNP Clinvar
16291983 0.0 A G PASS 0/1 47 SYNONYMOUS_CODING LOW None 0.28275 0.28270 0.31330 None None None None None None ABCC6|0.022547171|72.9%
View exome_all 16 rs9940825
dbSNP Clinvar
16291971 0.0 C T PASS 0/1 53 SYNONYMOUS_CODING LOW None 0.23223 0.23220 0.30603 None None None None None None ABCC6|0.022547171|72.9%
View exome_all 16 rs7500834
dbSNP Clinvar
16272670 0.0 T C PASS 1/1 35 SYNONYMOUS_CODING LOW None 0.96446 0.96450 0.03548 None None None None None None ABCC6|0.022547171|72.9%
View exome_all 16 rs6416668
dbSNP Clinvar
16271357 0.0 T C PASS 1/1 51 NON_SYNONYMOUS_CODING MODERATE None 0.96426 0.96430 0.03556 0.29 0.00 None None None None None None ABCC6|0.022547171|72.9%

ACSF3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs6500526
dbSNP Clinvar
89167395 0.0 C T PASS 1/1 40 SYNONYMOUS_CODING LOW None 0.61901 0.61900 0.27585 None None None None None None ACSF3|0.012049699|79.2%
View exome_all 16 rs7193255
dbSNP Clinvar
89167404 0.0 T C PASS 1/1 40 SYNONYMOUS_CODING LOW None 0.61981 0.61980 0.27532 None None None None None None ACSF3|0.012049699|79.2%
View exome_all 16 rs12447947
dbSNP Clinvar
89199651 0.0 G A PASS 1/1 58 SYNONYMOUS_CODING LOW None 0.14537 0.14540 0.26277 None None None None None None ACSF3|0.012049699|79.2%
View exome_all 16 rs3743979
dbSNP Clinvar
89180883 0.0 G A PASS 1/1 129 NON_SYNONYMOUS_CODING MODERATE None 0.62959 0.62960 0.29186 0.10 0.63 None None None None None None ACSF3|0.012049699|79.2%
View exome_all 16 rs6500529
dbSNP Clinvar
89167458 0.0 C A PASS 1/1 34 SYNONYMOUS_CODING LOW None 0.61921 0.61920 None None None None None None ACSF3|0.012049699|79.2%
View exome_all 16 rs6500527
dbSNP Clinvar
89167431 0.0 G C PASS 1/1 32 SYNONYMOUS_CODING LOW None 0.61981 0.61980 0.27755 None None None None None None ACSF3|0.012049699|79.2%
View exome_all 16 rs6500528
dbSNP Clinvar
89167443 0.0 T C PASS 1/1 40 SYNONYMOUS_CODING LOW None 0.61981 0.61980 0.27455 None None None None None None ACSF3|0.012049699|79.2%

ACSM2A

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs9924150
dbSNP Clinvar
20492000 0.0 A G PASS 0/1 53 NON_SYNONYMOUS_CODING MODERATE None 0.82628 0.82630 1.00 0.00 None None None None None None ACSM2A|0.005190474|85.6%

ACSM2B

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs16970280
dbSNP Clinvar
20552075 0.0 G T PASS 0/1 51 SYNONYMOUS_CODING LOW None 0.70607 0.70610 0.18525 None None None None None None ACSM2B|0.005001118|85.81%
View exome_all 16 rs8056693
dbSNP Clinvar
20570661 0.0 T C PASS 1/1 66 NON_SYNONYMOUS_CODING MODERATE None 0.95347 0.95350 1.00 0.00 None None None None None None ACSM2B|0.005001118|85.81%
View exome_all 16 rs78729855
dbSNP Clinvar
20576048 0.0 C A PASS 0/1 76 SYNONYMOUS_CODING LOW None 0.26518 0.26520 0.14797 None None None None None None ACSM2B|0.005001118|85.81%

ADAMTS18

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs9930984
dbSNP Clinvar
77353973 0.0 G T PASS 0/1 61 NON_SYNONYMOUS_CODING MODERATE None 0.63498 0.63500 0.48561 0.12 0.00 None None None None None None ADAMTS18|0.112557021|48.75%
View exome_all 16 rs3743749
dbSNP Clinvar
77323235 0.0 C G PASS 0/1 33 NON_SYNONYMOUS_CODING MODERATE None 0.18191 0.18190 0.16467 0.01 0.01 None None None None None None ADAMTS18|0.112557021|48.75%
View exome_all 16 rs11643211
dbSNP Clinvar
77401545 0.0 A G PASS 1/1 59 NON_SYNONYMOUS_CODING MODERATE None 0.36681 0.36680 0.25262 0.41 0.15 None None None None None None ADAMTS18|0.112557021|48.75%
View exome_all 16 rs8059275
dbSNP Clinvar
77389956 0.0 A G PASS 1/1 102 SYNONYMOUS_CODING LOW None 0.88219 0.88220 0.12527 None None None None None None ADAMTS18|0.112557021|48.75%
View exome_all 16 rs11640912
dbSNP Clinvar
77359919 0.0 A T PASS 1/1 64 NON_SYNONYMOUS_CODING MODERATE None 0.43950 0.43950 0.31887 0.00 0.00 None None None None None None ADAMTS18|0.112557021|48.75%

ADCY9

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs2230742
dbSNP Clinvar
4016676 0.0 A G PASS 0/1 129 SYNONYMOUS_CODING LOW None 0.73063 0.73060 0.19871 None None None None None None ADCY9|0.187231083|38.15%
View exome_all 16 rs2240735
dbSNP Clinvar
4027605 0.0 C T PASS 0/1 116 SYNONYMOUS_CODING LOW None 0.46845 0.46850 0.42151 None None None None None None ADCY9|0.187231083|38.15%

AHSP

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs17677
dbSNP Clinvar
31539934 0.0 G T PASS 1/1 56 SYNONYMOUS_CODING LOW None 0.31749 0.31750 0.24604 None None None None None None AHSP|0.009422794|81.36%

ANKRD11

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs2279348
dbSNP Clinvar
89350038 0.0 G A PASS 0/1 97 NON_SYNONYMOUS_CODING MODERATE None 0.53355 0.53350 0.30299 0.00 None None None None None None ANKRD11|0.017604248|75.55%
View exome_all 16 rs2279349
dbSNP Clinvar
89350178 0.0 G A PASS 1/1 169 SYNONYMOUS_CODING LOW None 0.76358 0.76360 0.14782 None None None None None None ANKRD11|0.017604248|75.55%
View exome_all 16 rs4785560
dbSNP Clinvar
89345822 0.0 G C PASS 0/1 81 NON_SYNONYMOUS_CODING MODERATE None 0.18590 0.18590 0.00 None None None None None None ANKRD11|0.017604248|75.55%

ATP2A1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs6565259
dbSNP Clinvar
28898793 0.0 T C PASS 0/1 44 SYNONYMOUS_CODING LOW None 0.33886 0.33890 0.40365 None None None None None None ATP2A1|0.341919213|24.7%

AXIN1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs1805105
dbSNP Clinvar
396264 0.0 A G PASS 0/1 66 SYNONYMOUS_CODING LOW None 0.63898 0.63900 0.28587 None None None None None None AXIN1|0.853904353|4.55%

BBS2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
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Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs4784677
dbSNP Clinvar
56548501 0.0 C T PASS 1/1 73 NON_SYNONYMOUS_CODING MODERATE None 0.99641 0.99640 0.00554 1.00 0.00 None None None None None None BBS2|0.509758209|15.38%

BCMO1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs12934922
dbSNP Clinvar
81301694 0.0 A T PASS 0/1 110 NON_SYNONYMOUS_CODING MODERATE None 0.22724 0.22720 0.35251 0.03 0.00 None None None None None None BCO1|0.044162038|64.47%
View exome_all 16 rs7500996
dbSNP Clinvar
81295902 0.0 T C PASS 0/1 61 None None None 0.24181 0.24180 0.23731 0.00 None None None None None None BCO1|0.044162038|64.47%

CACNA1H

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs2753326
dbSNP Clinvar
1261219 0.0 A G PASS 1/1 77 SYNONYMOUS_CODING LOW None 0.70967 0.70970 0.35679 None None None None None None CACNA1H|0.025235592|71.7%
View exome_all 16 rs8063574
dbSNP Clinvar
1260481 0.0 T C PASS 1/1 61 SYNONYMOUS_CODING LOW None 0.91993 0.91990 0.15296 None None None None None None CACNA1H|0.025235592|71.7%
View exome_all 16 rs2745136
dbSNP Clinvar
1268494 0.0 C T PASS 1/1 49 SYNONYMOUS_CODING LOW None 0.69908 0.69910 0.34899 None None None None None None CACNA1H|0.025235592|71.7%
View exome_all 16 rs2738893
dbSNP Clinvar
1269029 0.0 T C PASS 1/1 71 SYNONYMOUS_CODING LOW None 0.69169 0.69170 0.33956 None None None None None None CACNA1H|0.025235592|71.7%
View exome_all 16 rs8044363
dbSNP Clinvar
1250559 0.0 T C PASS 0/1 108 SYNONYMOUS_CODING LOW None 0.33267 0.33270 0.43814 None None None None None None CACNA1H|0.025235592|71.7%
View exome_all 16 rs9934839
dbSNP Clinvar
1252259 0.0 A G PASS 1/1 38 SYNONYMOUS_CODING LOW None 0.39657 0.39660 0.45393 None None None None None None CACNA1H|0.025235592|71.7%
View exome_all 16 rs61910714
dbSNP Clinvar
1260969 0.0 G A PASS 0/1 32 SPLICE_SITE_REGION+SYNONYMOUS_CODING LOW None 0.06490 0.06490 0.09794 None None None None None None CACNA1H|0.025235592|71.7%
View exome_all 16 rs2753325
dbSNP Clinvar
1261222 0.0 A G PASS 1/1 82 SYNONYMOUS_CODING LOW None 0.70967 0.70970 0.35648 None None None None None None CACNA1H|0.025235592|71.7%
View exome_all 16 rs4984637
dbSNP Clinvar
1261282 0.0 T C PASS 1/1 71 SYNONYMOUS_CODING LOW None 0.91773 0.91770 0.15203 None None None None None None CACNA1H|0.025235592|71.7%

CCL22

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
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Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs4359426
dbSNP Clinvar
57392733 0.0 A C PASS 1/1 54 NON_SYNONYMOUS_CODING MODERATE None 0.91653 0.91650 0.04817 1.00 0.00 None None None None None None CCL22|0.005053842|85.74%
View exome_all 16 rs41398344
dbSNP Clinvar
57394393 0.0 T C PASS 0/1 76 NON_SYNONYMOUS_CODING MODERATE None 0.00280 0.00280 0.00623 0.04 0.48 None None None None None None CCL22|0.005053842|85.74%

CD19

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs2904880
dbSNP Clinvar
28944396 0.0 C G PASS 0/1 60 NON_SYNONYMOUS_CODING MODERATE None 0.83027 0.83030 0.23065 0.18 0.00 None None None None None None RABEP2|0.084786865|54.26%,CD19|0.205476982|36.07%
View exome_all 16 rs35979293
dbSNP Clinvar
28944700 0.0 G T PASS 0/1 96 SYNONYMOUS_CODING LOW None 0.18710 0.18710 0.27536 None None None None None None RABEP2|0.084786865|54.26%,CD19|0.205476982|36.07%

CDH1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs1801552
dbSNP Clinvar
68857441 0.0 T C PASS 0/1 29 SYNONYMOUS_CODING LOW None 0.71865 0.71870 0.28386 None None None None None None CDH1|0.998372534|0.51%

CDH13

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs6565105
dbSNP Clinvar
83065664 0.0 G A PASS 0/1 72 SYNONYMOUS_CODING LOW None 0.53415 0.53410 0.44654 None None None None None None CDH13|0.953699546|2.14%
View exome_all 16 rs1048612
dbSNP Clinvar
83817019 0.0 A G PASS 1/1 71 SYNONYMOUS_CODING LOW None 0.81609 0.81610 0.18509 None None None None None None CDH13|0.953699546|2.14%
View exome_all 16 rs7188594
dbSNP Clinvar
83214480 0.0 C A PASS 0/1 41 None None None 0.45008 0.45010 None None None None None None CDH13|0.953699546|2.14%
View exome_all 16 rs4782724
dbSNP Clinvar
82673047 0.0 C T PASS 1/1 36 NON_SYNONYMOUS_CODING MODERATE None 0.93870 0.93870 1.00 0.00 None None None None None None CDH13|0.953699546|2.14%

CDH3

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs2274239
dbSNP Clinvar
68725783 0.0 G A PASS 1/1 70 SYNONYMOUS_CODING LOW None 0.57448 0.57450 0.37458 None None None None None None CDH3|0.072383373|56.91%
View exome_all 16 rs1126933
dbSNP Clinvar
68721533 0.0 G C PASS 0/1 120 NON_SYNONYMOUS_CODING MODERATE None 0.30990 0.30990 0.30671 0.24 1.00 None None None None None None CDH3|0.072383373|56.91%
View exome_all 16 rs17715450
dbSNP Clinvar
68729785 0.0 C A PASS 1/1 53 SYNONYMOUS_CODING LOW None 0.46685 0.46690 0.49862 None None None None None None CDH3|0.072383373|56.91%
View exome_all 16 rs2296409
dbSNP Clinvar
68713730 0.0 G A PASS 1/1 22 SYNONYMOUS_CODING LOW None 0.60783 0.60780 0.35980 None None None None None None CDH3|0.072383373|56.91%
View exome_all 16 rs2296408
dbSNP Clinvar
68713823 0.0 C A PASS 1/1 52 SYNONYMOUS_CODING LOW None 0.60783 0.60780 0.35973 None None None None None None CDH3|0.072383373|56.91%
View exome_all 16 rs2296405
dbSNP Clinvar
68721470 0.0 T C PASS 1/1 105 SYNONYMOUS_CODING LOW None 0.59744 0.59740 0.36396 None None None None None None CDH3|0.072383373|56.91%

CDT1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs510862
dbSNP Clinvar
88872511 0.0 T C PASS 0/1 102 SYNONYMOUS_CODING LOW None 0.87021 0.87020 0.15235 None None None None None None CDT1|0.134079619|45.26%
View exome_all 16 rs480727
dbSNP Clinvar
88872229 0.0 A G PASS 0/1 97 NON_SYNONYMOUS_CODING MODERATE None 0.57129 0.57130 0.49546 0.20 0.01 None None None None None None CDT1|0.134079619|45.26%
View exome_all 16 rs507329
dbSNP Clinvar
88872145 0.0 T C PASS 1/1 144 NON_SYNONYMOUS_CODING MODERATE None 0.99980 0.99980 0.00046 1.00 0.00 None None None None None None CDT1|0.134079619|45.26%
View exome_all 16 rs475667
dbSNP Clinvar
88870967 0.0 T C PASS 0/1 46 SYNONYMOUS_CODING LOW None 0.13099 0.13100 0.10868 None None None None None None CDT1|0.134079619|45.26%
View exome_all 16 rs368049819
dbSNP Clinvar
88873609 0.0 C T PASS 0/1 64 NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION MODERATE None 0.00008 0.00 1.00 None None None None None None CDT1|0.134079619|45.26%

CETP

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs5882
dbSNP Clinvar
57016092 0.0 G A PASS 0/1 41 NON_SYNONYMOUS_CODING MODERATE None 0.53395 0.53390 0.40882 1.00 0.00 None None None None None None CETP|0.018396034|75.02%

CIITA

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs2229320
dbSNP Clinvar
11001743 0.0 G A PASS 0/1 41 SYNONYMOUS_CODING LOW None 0.18930 0.18930 0.15116 None None None None None None CIITA|0.029865034|69.47%
View exome_all 16 rs2229322
dbSNP Clinvar
11016045 0.0 C T PASS 0/1 76 SYNONYMOUS_CODING LOW None 0.10483 0.10480 0.09805 None None None None None None CIITA|0.029865034|69.47%
View exome_all 16 rs8046121
dbSNP Clinvar
10995933 0.0 A G PASS 1/1 45 NON_SYNONYMOUS_CODING MODERATE None 0.98722 0.98720 0.01685 1.00 0.00 None None None None None None CIITA|0.029865034|69.47%
View exome_all 16 rs7197779
dbSNP Clinvar
11002927 0.0 A G PASS 1/1 84 NON_SYNONYMOUS_CODING MODERATE None 0.92871 0.92870 0.08011 0.33 0.00 None None None None None None CIITA|0.029865034|69.47%
View exome_all 16 rs2228238
dbSNP Clinvar
11002904 0.0 G A PASS 1/1 54 SYNONYMOUS_CODING LOW None 0.66314 0.66310 0.36532 None None None None None None CIITA|0.029865034|69.47%

CLCN7

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs2235579
dbSNP Clinvar
1503879 0.0 T A PASS 1/1 33 SYNONYMOUS_CODING LOW None 0.55591 0.55590 0.49069 None None None None None None CLCN7|0.061996172|59.31%
View exome_all 16 rs3751884
dbSNP Clinvar
1524850 0.0 A G PASS 1/1 33 SYNONYMOUS_CODING LOW None 0.64936 0.64940 None None None None None None CLCN7|0.061996172|59.31%

CNGB1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs13336595
dbSNP Clinvar
57996960 0.0 C T PASS 1/1 66 NON_SYNONYMOUS_CODING MODERATE None 0.75200 0.75200 0.24504 0.05 0.28 4.68 0.02 0.35812 T None None None None CNGB1|0.031332972|68.86%
View exome_all 16 rs413562
dbSNP Clinvar
57937856 0.0 G C PASS 0/1 76 SYNONYMOUS_CODING LOW None 0.15655 0.70490 0.20836 None None None None None None CNGB1|0.031332972|68.86%
View exome_all 16 rs17821448
dbSNP Clinvar
57996932 0.0 G A PASS 1/1 74 SYNONYMOUS_CODING LOW None 0.31410 0.31410 0.36627 None None None None None None CNGB1|0.031332972|68.86%
View exome_all 16 rs376270
dbSNP Clinvar
57950057 0.0 G A PASS 1/1 83 SYNONYMOUS_CODING LOW None 0.36202 0.36200 0.29391 None None None None None None CNGB1|0.031332972|68.86%

CNTNAP4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs59314262,rs397777375
dbSNP Clinvar
76311602 0.0 G GT PASS 1/1 78 None None None 1.00000 1.00000 0.00087 None None None None None None CNTNAP4|0.147801581|43.33%
View exome_all 16 rs12933808
dbSNP Clinvar
76532583 0.0 A G PASS 1/1 16 NON_SYNONYMOUS_CODING MODERATE None 0.83946 0.83950 0.15911 0.48 0.00 None None None None None None CNTNAP4|0.147801581|43.33%

COG4

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs3762171
dbSNP Clinvar
70546234 0.0 G A PASS 0/1 87 SYNONYMOUS_CODING LOW None 0.47025 0.47020 0.38181 None None None None None None COG4|0.386198811|21.66%
View exome_all 16 rs11054
dbSNP Clinvar
70515355 0.0 C T PASS 0/1 66 SYNONYMOUS_CODING LOW None 0.37380 0.37380 0.48407 None None None None None None COG4|0.386198811|21.66%
View exome_all 16 rs3931036
dbSNP Clinvar
70548297 0.0 G A PASS 1/1 32 NON_SYNONYMOUS_CODING MODERATE None 0.95947 0.95950 0.04440 1.00 0.00 None None None None None None COG4|0.386198811|21.66%

COG8

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs11542583
dbSNP Clinvar
69373414 0.0 T C PASS 0/1 31 SYNONYMOUS_CODING LOW None 0.25759 0.25760 0.32437 None None None None None None COG8|0.236893117|32.72%,NIP7|0.635569208|10.59%

COX4I1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs2599091
dbSNP Clinvar
85838653 0.0 T C PASS 1/1 73 SYNONYMOUS_CODING LOW None 0.97704 0.97700 0.02762 None None None None None None COX4I1|0.092550833|52.7%

CRYM

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs14122
dbSNP Clinvar
21272591 0.0 G C PASS 0/1 64 SYNONYMOUS_CODING LOW None 0.50260 0.50260 0.46853 None None None None None None CRYM|0.245016591|32%

CYBA

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs1049254
dbSNP Clinvar
88709828 0.0 A G PASS 0/1 54 None None None 0.73742 0.73740 0.31531 1.00 0.00 None None None None None None CYBA|0.038823068|66.16%
View exome_all 16 rs8053867
dbSNP Clinvar
88717386 0.0 T C PASS 1/1 45 SYNONYMOUS_CODING LOW None 0.99561 0.99560 0.00278 None None None None None None CYBA|0.038823068|66.16%
View exome_all 16 rs4673
dbSNP Clinvar
88713236 0.0 A G PASS 1/1 95 NON_SYNONYMOUS_CODING MODERATE None 0.66434 0.66430 0.37842 0.28 0.02 None None None None None None CYBA|0.038823068|66.16%
View exome_all 16 rs12123
dbSNP Clinvar
88709968 0.0 A G PASS 0/1 82 None None None 0.00879 0.00879 0.01729 None None None None None None CYBA|0.038823068|66.16%

DHODH

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs3213422
dbSNP Clinvar
72042682 0.0 A C PASS 0/1 40 NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION MODERATE None 0.56410 0.56410 0.45535 0.19 0.01 None None None None None None DHODH|0.325470662|25.78%

DNAAF1

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View exome_all 16 rs111472069
dbSNP Clinvar
84199444 0.0 C G PASS 0/1 74 NON_SYNONYMOUS_CODING MODERATE None 0.02177 0.02177 0.02885 1.00 0.01 None None None None None None DNAAF1|0.000486573|98.51%
View exome_all 16 rs112191420
dbSNP Clinvar
84199513 0.0 C A PASS 0/1 74 SYNONYMOUS_CODING LOW None 0.02177 0.02177 0.02892 None None None None None None DNAAF1|0.000486573|98.51%
View exome_all 16 rs17856705
dbSNP Clinvar
84203612 0.0 A G PASS 0/1 86 NON_SYNONYMOUS_CODING MODERATE None 0.32109 0.32110 0.37875 0.18 0.01 None None None None None None DNAAF1|0.000486573|98.51%
View exome_all 16 rs9972733
dbSNP Clinvar
84203730 0.0 G C PASS 0/1 85 NON_SYNONYMOUS_CODING MODERATE None 0.11282 0.11280 0.07477 0.23 0.00 None None None None None None DNAAF1|0.000486573|98.51%